BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029162
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A...    80   6e-13
ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223...    80   6e-13

>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 50/134 (37%), Positives = 71/134 (52%)
 Frame = -1

Query: 473 WKSPSPNYFKFNIDGFSLGNLGPAGAGGVFRDVFGQFVMDFATPLRQASTSRAEALALRT 294
           WK P     K N+DG S GN G AGAGGV RD  G ++  FA  +   S+  AE  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 293 SL*LAKQMELGNVEFETDSQVIYNLVKTEAQQISMDIKAIVLDIQDLLAENSTSKLYWTY 114
            L LA       V+ E+DS+V+  L+  ++ ++  +   I++ I+ +L  N     Y  Y
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN-IIMQIKGMLGRNWEVTTYHVY 194

Query: 113 REGNCVADFFAKLG 72
           RE NCVAD+ A  G
Sbjct: 195 REANCVADWLANYG 208


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 49/134 (36%), Positives = 72/134 (53%)
 Frame = -1

Query: 473 WKSPSPNYFKFNIDGFSLGNLGPAGAGGVFRDVFGQFVMDFATPLRQASTSRAEALALRT 294
           WK P     K N+DG S GN G AGAGGV R+  G ++  FA  +   S+  AE  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYV 135

Query: 293 SL*LAKQMELGNVEFETDSQVIYNLVKTEAQQISMDIKAIVLDIQDLLAENSTSKLYWTY 114
            L LA       V+ E+DS+V+  L+  ++ ++  +   I++ I+D+L  +     Y  Y
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN-IIMQIKDMLGRDWEVTTYHVY 194

Query: 113 REGNCVADFFAKLG 72
           RE NCVAD+ A  G
Sbjct: 195 REANCVADWLANYG 208


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 49/134 (36%), Positives = 71/134 (52%)
 Frame = -1

Query: 473 WKSPSPNYFKFNIDGFSLGNLGPAGAGGVFRDVFGQFVMDFATPLRQASTSRAEALALRT 294
           WK P     K N+DG S GN G AGAGGV RD  G ++  FA  +   S+  AE  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 293 SL*LAKQMELGNVEFETDSQVIYNLVKTEAQQISMDIKAIVLDIQDLLAENSTSKLYWTY 114
            L LA       V+ E+DS+V+  L+  ++ ++  +   I++ I+ +L  +     Y  Y
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYN-IIMQIKGMLGRDWEVTTYHVY 194

Query: 113 REGNCVADFFAKLG 72
           RE NCVAD+ A  G
Sbjct: 195 REANCVADWLANYG 208


>ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus] gi|449488498|ref|XP_004158057.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 205

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
 Frame = -1

Query: 485 VPICWKSPSPNYFKFNIDGFSLGNLGP--AGAGGVFRDVFGQFVMDFATPLRQASTSRAE 312
           +P+ W  P   + K N DG S G +GP  A  GGV RD   QF++ +A  + +A +S AE
Sbjct: 32  IPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDHKAQFLLGYAESIGRAYSSMAE 91

Query: 311 ALALRTSL*LAKQMELGNVEFETDSQVIYNLVKTEAQQISMDIKAIVLDIQDLLAENSTS 132
             AL   L L  +    +V  E D++ +  ++    +   M+ ++ +  I+ LL +    
Sbjct: 92  LKALTKGLELVLENGWKDVWVEGDAKGLVEILAENREVKCMEARSYLRHIKSLLLDFDNC 151

Query: 131 KLYWTYREGNCVADFFAKLGSNQASDQTWWSNP 33
           K+   YREGN VAD FA +G      + W   P
Sbjct: 152 KVSHIYREGNKVADRFASIGHRCKKLEIWRELP 184


>ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223536063|gb|EEF37721.1|
           nuclease, putative [Ricinus communis]
          Length = 201

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 43/151 (28%), Positives = 73/151 (48%)
 Frame = -1

Query: 485 VPICWKSPSPNYFKFNIDGFSLGNLGPAGAGGVFRDVFGQFVMDFATPLRQASTSRAEAL 306
           +P+ W+ P   + K N DG   G  G    GGVFR+   +F++ +A  + +++++ AE  
Sbjct: 30  IPVAWEKPQVGWTKLNFDGSCKGREGKGSIGGVFRNHKAEFLLGYAESIGRSTSTIAELA 89

Query: 305 ALRTSL*LAKQMELGNVEFETDSQVIYNLVKTEAQQISMDIKAIVLDIQDLLAENSTSKL 126
           ALR  L L  +    NV  E D++ +  ++    +     ++  V DI  ++ E     +
Sbjct: 90  ALRRGLELVLENGWSNVWLEGDAKTLLEIIVKRRKVRCAQMQRHVSDINLIIPELDNCIV 149

Query: 125 YWTYREGNCVADFFAKLGSNQASDQTWWSNP 33
              YREGN  AD  A++G      + WW  P
Sbjct: 150 SHVYREGNRAADKLAQIGHQLQKPKIWWHIP 180