BLASTX nr result

ID: Coptis25_contig00029161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029161
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629706.1| Neutral amino acid transport protein [Medica...    69   3e-20
ref|XP_003524194.1| PREDICTED: uncharacterized transporter lpg16...    69   1e-18
ref|XP_004154702.1| PREDICTED: probable polyamine transporter At...    62   3e-18
ref|XP_004139136.1| PREDICTED: LOW QUALITY PROTEIN: probable pol...    62   3e-18
ref|XP_002884975.1| amino acid permease family protein [Arabidop...    65   3e-17

>ref|XP_003629706.1| Neutral amino acid transport protein [Medicago truncatula]
           gi|355523728|gb|AET04182.1| Neutral amino acid transport
           protein [Medicago truncatula]
          Length = 484

 Score = 68.6 bits (166), Expect(2) = 3e-20
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = -3

Query: 125 STGLTLGEKGRKTDWTLYFNTLFWNLNFWDNASTLAGEVDK 3
           S  L+LG++G + DWTL+FNT+FWNLNFWD+ASTLAGEV++
Sbjct: 207 SRWLSLGQEGVEKDWTLFFNTIFWNLNFWDSASTLAGEVEE 247



 Score = 54.7 bits (130), Expect(2) = 3e-20
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -1

Query: 223 GLTVVGYGAVSLGIISLLPFVLMAFISIPKLQPRRGL 113
           GL +VGY AV LG+ISLLPFVLM+ IS+PK+ P R L
Sbjct: 174 GLAIVGYTAVGLGVISLLPFVLMSLISVPKIDPSRWL 210


>ref|XP_003524194.1| PREDICTED: uncharacterized transporter lpg1691-like [Glycine max]
          Length = 482

 Score = 68.6 bits (166), Expect(2) = 1e-18
 Identities = 27/38 (71%), Positives = 35/38 (92%)
 Frame = -3

Query: 116 LTLGEKGRKTDWTLYFNTLFWNLNFWDNASTLAGEVDK 3
           L+ G++G + DWTLYFNT+FWNLNFWD+ASTLAGEV++
Sbjct: 211 LSFGQEGVENDWTLYFNTIFWNLNFWDSASTLAGEVEE 248



 Score = 49.3 bits (116), Expect(2) = 1e-18
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = -1

Query: 223 GLTVVGYGAVSLGIISLLPFVLMAFISIPKLQPRRGLHWAKK 98
           GL +VGY AV LG+ SLLPFVL++  S+PK+ P + L + ++
Sbjct: 175 GLAIVGYTAVVLGVFSLLPFVLLSLFSLPKIDPNKWLSFGQE 216


>ref|XP_004154702.1| PREDICTED: probable polyamine transporter At3g13620-like [Cucumis
           sativus]
          Length = 474

 Score = 62.0 bits (149), Expect(2) = 3e-18
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 116 LTLGEKGRKTDWTLYFNTLFWNLNFWDNASTLAGEVD 6
           L LG+K R  DW LY NTLFWNLNFWDN STLAGEV+
Sbjct: 208 LILGDKER--DWNLYLNTLFWNLNFWDNVSTLAGEVE 242



 Score = 54.3 bits (129), Expect(2) = 3e-18
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -1

Query: 223 GLTVVGYGAVSLGIISLLPFVLMAFISIPKLQPRRGLHWAKKE 95
           GLT+VGY AV L  +SLLPF+LM FI+IPK++P R L    KE
Sbjct: 172 GLTIVGYVAVVLAFLSLLPFILMTFIAIPKIKPHRWLILGDKE 214


>ref|XP_004139136.1| PREDICTED: LOW QUALITY PROTEIN: probable polyamine transporter
           At3g13620-like [Cucumis sativus]
          Length = 455

 Score = 62.0 bits (149), Expect(2) = 3e-18
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -3

Query: 116 LTLGEKGRKTDWTLYFNTLFWNLNFWDNASTLAGEVD 6
           L LG+K R  DW LY NTLFWNLNFWDN STLAGEV+
Sbjct: 189 LILGDKER--DWNLYLNTLFWNLNFWDNVSTLAGEVE 223



 Score = 54.3 bits (129), Expect(2) = 3e-18
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -1

Query: 223 GLTVVGYGAVSLGIISLLPFVLMAFISIPKLQPRRGLHWAKKE 95
           GLT+VGY AV L  +SLLPF+LM FI+IPK++P R L    KE
Sbjct: 153 GLTIVGYVAVVLAFLSLLPFILMTFIAIPKIKPHRWLILGDKE 195


>ref|XP_002884975.1| amino acid permease family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330815|gb|EFH61234.1| amino acid permease
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score = 65.1 bits (157), Expect(2) = 3e-17
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -3

Query: 113 TLGEKGRKTDWTLYFNTLFWNLNFWDNASTLAGEVDK 3
           +LG K  K DW LYFNTLFWNLNFWDN STLAGEVD+
Sbjct: 201 SLGNK--KKDWNLYFNTLFWNLNFWDNVSTLAGEVDE 235



 Score = 48.1 bits (113), Expect(2) = 3e-17
 Identities = 20/35 (57%), Positives = 29/35 (82%)
 Frame = -1

Query: 223 GLTVVGYGAVSLGIISLLPFVLMAFISIPKLQPRR 119
           GL +VGY AV LG++SL PF++M+ ++IPK+QP R
Sbjct: 164 GLAIVGYAAVVLGLVSLSPFLVMSAMAIPKIQPHR 198


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