BLASTX nr result

ID: Coptis25_contig00029149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029149
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510176.1| conserved hypothetical protein [Ricinus comm...   176   5e-42
ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
emb|CBI19483.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257...   171   2e-40
ref|XP_002301167.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40

>ref|XP_002510176.1| conserved hypothetical protein [Ricinus communis]
           gi|223550877|gb|EEF52363.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  176 bits (446), Expect = 5e-42
 Identities = 94/157 (59%), Positives = 107/157 (68%), Gaps = 1/157 (0%)
 Frame = +3

Query: 183 EETRRRQNEEGKA-RGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTLHRARES 359
           E T R    +  A R LL LARQLINQG  + ALQAVVMA+++ GGDEAVFQ+LHRARE 
Sbjct: 11  EMTERESVPQNDAVRELLALARQLINQGKPTQALQAVVMAMRTKGGDEAVFQSLHRAREL 70

Query: 360 YRNRXXXXXXXXXXXXXXXXXXIAEVQPLASESLPFDTGGSSMAMTPDTHGSSILAKSGR 539
           YRNR                  I E QP  SE    + GG S+  TPD HG+SILA++GR
Sbjct: 71  YRNRVQENTAVDQLASLFAECAIVEAQPSKSEPSAHNVGGPSV--TPDAHGNSILAETGR 128

Query: 540 QQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCC 650
            QI+LDAFSDGSSFICLQCGGLVSNHR+DEH  YWCC
Sbjct: 129 MQIVLDAFSDGSSFICLQCGGLVSNHRRDEHYAYWCC 165


>ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|222835486|gb|EEE73921.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  174 bits (440), Expect = 3e-41
 Identities = 88/148 (59%), Positives = 102/148 (68%)
 Frame = +3

Query: 204 NEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTLHRARESYRNRXXXX 383
           ++    RGLLTLARQLI+QG  S ALQAVVMA+++ GGD+AVFQ+LHRARE Y NR    
Sbjct: 28  DDNNNVRGLLTLARQLISQGKPSQALQAVVMAMRTKGGDQAVFQSLHRARELYLNRLQEN 87

Query: 384 XXXXXXXXXXXXXXIAEVQPLASESLPFDTGGSSMAMTPDTHGSSILAKSGRQQIMLDAF 563
                         IAE QP  +E  P + G SS +   D H  SILA++GR QI+LDAF
Sbjct: 88  TAVDHLASLFAECAIAEAQPFLAEQTPLNVGASSRSAESDVHVHSILAETGRTQIVLDAF 147

Query: 564 SDGSSFICLQCGGLVSNHRKDEHLTYWC 647
           SDGSSFICLQCGGLVSNHRKDEH  YWC
Sbjct: 148 SDGSSFICLQCGGLVSNHRKDEHYAYWC 175


>emb|CBI19483.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  171 bits (433), Expect = 2e-40
 Identities = 90/165 (54%), Positives = 112/165 (67%)
 Frame = +3

Query: 162 METDNRGEETRRRQNEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTL 341
           M+T+     T    N+    + LL+LARQLIN+G  S ALQ VVMA+++ GGDEA+FQ+L
Sbjct: 1   MDTETAASGT----NQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAIFQSL 56

Query: 342 HRARESYRNRXXXXXXXXXXXXXXXXXXIAEVQPLASESLPFDTGGSSMAMTPDTHGSSI 521
           HRARE YRNR                  IAEV+P  +E  P D    S+A  PD++ +SI
Sbjct: 57  HRARELYRNRLQANAAADQLACLFAECAIAEVEPCNAEPSPHDVVSPSIA--PDSNETSI 114

Query: 522 LAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCCPL 656
           LA++GR+QI+LDAFSDGSSFICLQCGGLVSNHRKDEH  YWCC +
Sbjct: 115 LAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 159


>ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257564 [Vitis vinifera]
          Length = 190

 Score =  171 bits (433), Expect = 2e-40
 Identities = 90/165 (54%), Positives = 112/165 (67%)
 Frame = +3

Query: 162 METDNRGEETRRRQNEEGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGDEAVFQTL 341
           M+T+     T    N+    + LL+LARQLIN+G  S ALQ VVMA+++ GGDEA+FQ+L
Sbjct: 32  MDTETAASGT----NQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAIFQSL 87

Query: 342 HRARESYRNRXXXXXXXXXXXXXXXXXXIAEVQPLASESLPFDTGGSSMAMTPDTHGSSI 521
           HRARE YRNR                  IAEV+P  +E  P D    S+A  PD++ +SI
Sbjct: 88  HRARELYRNRLQANAAADQLACLFAECAIAEVEPCNAEPSPHDVVSPSIA--PDSNETSI 145

Query: 522 LAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWCCPL 656
           LA++GR+QI+LDAFSDGSSFICLQCGGLVSNHRKDEH  YWCC +
Sbjct: 146 LAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 190


>ref|XP_002301167.1| predicted protein [Populus trichocarpa] gi|222842893|gb|EEE80440.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  169 bits (429), Expect = 5e-40
 Identities = 91/169 (53%), Positives = 112/169 (66%), Gaps = 5/169 (2%)
 Frame = +3

Query: 156 MEMETDNR--GEETRRRQNE---EGKARGLLTLARQLINQGNASLALQAVVMAVKSDGGD 320
           ME  T +R   + T  +Q++   +   R +LTLARQLINQGN S ALQAVVMA+++ GGD
Sbjct: 1   MEHRTADREMSDVTAAQQHQVPNDNNVREMLTLARQLINQGNPSQALQAVVMAMRTKGGD 60

Query: 321 EAVFQTLHRARESYRNRXXXXXXXXXXXXXXXXXXIAEVQPLASESLPFDTGGSSMAMTP 500
           +AVFQ+LHRARE Y NR                  IAE QPL  E  P + G  S +  P
Sbjct: 61  QAVFQSLHRARELYLNRLQESTNVDHLASLFAECAIAEAQPLQDEQTPLNGGDQSPSAVP 120

Query: 501 DTHGSSILAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRKDEHLTYWC 647
           + H +SILA++GR QI+LDAFSDGSSFICL CGGLVSN+RKDEH  +WC
Sbjct: 121 EVHVNSILAETGRTQIVLDAFSDGSSFICLHCGGLVSNYRKDEHYAFWC 169


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