BLASTX nr result

ID: Coptis25_contig00029130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029130
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   145   3e-33
emb|CBI37381.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   142   3e-32
ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   138   4e-31
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   138   4e-31

>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/126 (57%), Positives = 90/126 (71%)
 Frame = -2

Query: 380 DPVTAFARFLLTHQREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDFLP 201
           D V A A FL+ H    + S+VL  DP LHYP+ I FAEL + NP L+H +F+ PT+FL 
Sbjct: 12  DQVKALAEFLIRHYSSQLRSIVLAADPKLHYPLFIHFAELMDENPLLSHLVFSQPTEFLR 71

Query: 200 LFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVRVKHRGI 21
            FD AA+ A  IVL++ +        K+F+HVRIN+SGSPLECPE+FP IGRVRVKHRGI
Sbjct: 72  HFDKAALWAHKIVLKNLD-FGEKGIEKKFIHVRINVSGSPLECPETFPSIGRVRVKHRGI 130

Query: 20  LLTLKG 3
           LLTLKG
Sbjct: 131 LLTLKG 136


>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/128 (57%), Positives = 90/128 (70%)
 Frame = -2

Query: 386 DTDPVTAFARFLLTHQREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDF 207
           D + + A A FLL H    + S++L +D LLHYP+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 206 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVRVKHR 27
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE PE+FP IGRVRVKH 
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFPETFPSIGRVRVKHH 125

Query: 26  GILLTLKG 3
           GILLTLKG
Sbjct: 126 GILLTLKG 133


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/128 (57%), Positives = 90/128 (70%)
 Frame = -2

Query: 386 DTDPVTAFARFLLTHQREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDF 207
           D + + A A FLL H    + S++L +D LLHYP+HI FAEL   +P  AH LF+ P  +
Sbjct: 8   DPESLKALAVFLLRHHSSDLRSIILARDSLLHYPLHIQFAELMNDDPPRAHLLFSQPLQY 67

Query: 206 LPLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVRVKHR 27
           L LFDSAA  AQ  +L+++  +  NA  KE VHVRINISGSPLE PE+FP IGRVRVKH 
Sbjct: 68  LRLFDSAAFLAQRAILEEFGWV--NASVKESVHVRINISGSPLEFPETFPSIGRVRVKHH 125

Query: 26  GILLTLKG 3
           GILLTLKG
Sbjct: 126 GILLTLKG 133


>ref|XP_004155499.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 283

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/127 (52%), Positives = 90/127 (70%)
 Frame = -2

Query: 383 TDPVTAFARFLLTHQREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDFL 204
           T P+ AFA FL+ H  + + S+    DP LHYP+ ++FAEL + +P LA  LF+ PTD+L
Sbjct: 13  TSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLLFSRPTDYL 72

Query: 203 PLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVRVKHRG 24
            +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE PE+FP IG VRVKH G
Sbjct: 73  RVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFPETFPSIGSVRVKHHG 131

Query: 23  ILLTLKG 3
           +LLTLKG
Sbjct: 132 VLLTLKG 138


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/127 (52%), Positives = 90/127 (70%)
 Frame = -2

Query: 383 TDPVTAFARFLLTHQREHIHSLVLLKDPLLHYPIHIDFAELTEYNPFLAHHLFTNPTDFL 204
           T P+ AFA FL+ H  + + S+    DP LHYP+ ++FAEL + +P LA  LF+ PTD+L
Sbjct: 13  TSPLKAFATFLIRHHSDQLRSIAHSPDPKLHYPLFVEFAELMDDDPPLARLLFSRPTDYL 72

Query: 203 PLFDSAAINAQNIVLQDYNNIIGNACRKEFVHVRINISGSPLECPESFPGIGRVRVKHRG 24
            +FD AA+ A  I+L D    + N  +K+F+HVRIN++GSPLE PE+FP IG VRVKH G
Sbjct: 73  RVFDDAAVWAHMIILGDSKGSM-NGVKKDFIHVRINVTGSPLEFPETFPSIGSVRVKHHG 131

Query: 23  ILLTLKG 3
           +LLTLKG
Sbjct: 132 VLLTLKG 138


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