BLASTX nr result

ID: Coptis25_contig00029120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029120
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55106.1| hypothetical protein OsJ_02868 [Oryza sativa Japo...    64   1e-08
gb|EEC71203.1| hypothetical protein OsI_03117 [Oryza sativa Indi...    64   1e-08
dbj|BAK03876.1| predicted protein [Hordeum vulgare subsp. vulgare]     61   8e-08
ref|XP_002456070.1| hypothetical protein SORBIDRAFT_03g029850 [S...    61   8e-08
ref|XP_002318412.1| SET domain protein [Populus trichocarpa] gi|...    59   5e-07

>gb|EEE55106.1| hypothetical protein OsJ_02868 [Oryza sativa Japonica Group]
          Length = 1032

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 61  SRPPLIRTSRGRVQALPSRFSDSVMIDPWKKDK 159
           SRPP++RTSRGR Q LPSRF+DSV+IDPWKKDK
Sbjct: 91  SRPPVVRTSRGRAQVLPSRFNDSVLIDPWKKDK 123


>gb|EEC71203.1| hypothetical protein OsI_03117 [Oryza sativa Indica Group]
          Length = 1012

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 61  SRPPLIRTSRGRVQALPSRFSDSVMIDPWKKDK 159
           SRPP++RTSRGR Q LPSRF+DSV+IDPWKKDK
Sbjct: 91  SRPPVVRTSRGRAQVLPSRFNDSVLIDPWKKDK 123


>dbj|BAK03876.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1025

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +1

Query: 61  SRPPLIRTSRGRVQALPSRFSDSVMIDPWKKDK 159
           +RPP++RTSRGR Q LPSRF+DSV+IDPWKK+K
Sbjct: 80  TRPPVVRTSRGRAQVLPSRFNDSVLIDPWKKEK 112


>ref|XP_002456070.1| hypothetical protein SORBIDRAFT_03g029850 [Sorghum bicolor]
           gi|241928045|gb|EES01190.1| hypothetical protein
           SORBIDRAFT_03g029850 [Sorghum bicolor]
          Length = 1051

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +1

Query: 61  SRPPLIRTSRGRVQALPSRFSDSVMIDPWKKDK 159
           +RPP++RTSRGR Q LPSRF+DSV+IDPWKK+K
Sbjct: 84  ARPPVVRTSRGRTQVLPSRFNDSVLIDPWKKEK 116


>ref|XP_002318412.1| SET domain protein [Populus trichocarpa]
           gi|222859085|gb|EEE96632.1| SET domain protein [Populus
           trichocarpa]
          Length = 1078

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = +1

Query: 55  EVSRPPLIRTSRGRVQALPSRFSDSVMIDPWKKDKEKESNN 177
           EVSRPPL+RTSRGRVQ LPSRF+DSV ID W+K+ +  S +
Sbjct: 128 EVSRPPLVRTSRGRVQVLPSRFNDSV-IDNWRKESKTNSRD 167


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