BLASTX nr result
ID: Coptis25_contig00029086
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00029086 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806... 99 3e-19 ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|2... 98 8e-19 ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi... 96 2e-18 ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793... 96 3e-18 ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medi... 95 5e-18 >ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max] Length = 444 Score = 99.4 bits (246), Expect = 3e-19 Identities = 54/95 (56%), Positives = 63/95 (66%), Gaps = 3/95 (3%) Frame = -3 Query: 313 ILTTLGFQELAVAVPSLSDSAY---YTWNGPSTVFAPTDDXXXXXXXXXXXXXXXXVPQI 143 IL+ LGF ELA A PSLSD+A W GPST+FAP+D VP + Sbjct: 65 ILSHLGFHELATAAPSLSDAATTGSVAWTGPSTIFAPSD-------ASLRTCFSCSVPNL 117 Query: 142 LREHIVPGIFSYDYLNKLAFGTKLETMSTGRCITV 38 LREHIVPG+F+ DYL KLAFGTK+ET+S GRCITV Sbjct: 118 LREHIVPGLFTIDYLRKLAFGTKIETLSPGRCITV 152 >ref|XP_002306324.1| predicted protein [Populus trichocarpa] gi|222855773|gb|EEE93320.1| predicted protein [Populus trichocarpa] Length = 442 Score = 97.8 bits (242), Expect = 8e-19 Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 1/93 (1%) Frame = -3 Query: 313 ILTTLGFQELAVAVPSL-SDSAYYTWNGPSTVFAPTDDXXXXXXXXXXXXXXXXVPQILR 137 IL+ LGF +LA+AVPSL +DS W+GPST+FAP+D P +L Sbjct: 66 ILSHLGFTQLAMAVPSLPADSTTTAWSGPSTLFAPSDSSLRTCFSCSI-------PDLLH 118 Query: 136 EHIVPGIFSYDYLNKLAFGTKLETMSTGRCITV 38 EHIVPG+FS DYL KLAFGTK+ET+S GRCITV Sbjct: 119 EHIVPGLFSIDYLRKLAFGTKIETLSPGRCITV 151 >ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355524091|gb|AET04545.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] Length = 448 Score = 96.3 bits (238), Expect = 2e-18 Identities = 52/95 (54%), Positives = 63/95 (66%), Gaps = 3/95 (3%) Frame = -3 Query: 313 ILTTLGFQELAVAVPSLSDSAYYT---WNGPSTVFAPTDDXXXXXXXXXXXXXXXXVPQI 143 IL+ LGF ELA A PSLSD+A T W GP T+FAP+D VP + Sbjct: 63 ILSHLGFHELATAAPSLSDAATTTSPAWTGPFTIFAPSD-------ASLRTCFSCSVPNL 115 Query: 142 LREHIVPGIFSYDYLNKLAFGTKLETMSTGRCITV 38 LREHIVPGIF+ +YL +LAFGTK+ET+S GRC+TV Sbjct: 116 LREHIVPGIFTIEYLRRLAFGTKIETLSPGRCVTV 150 >ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793476 [Glycine max] Length = 440 Score = 95.9 bits (237), Expect = 3e-18 Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 3/95 (3%) Frame = -3 Query: 313 ILTTLGFQELAVAVPSLSDSAYY---TWNGPSTVFAPTDDXXXXXXXXXXXXXXXXVPQI 143 IL+ LGF +LA A PSLSD+A W GPST+FAP+D VP + Sbjct: 65 ILSHLGFHQLATAAPSLSDTATTGSAAWTGPSTIFAPSD-------ASLRTCFSCSVPNL 117 Query: 142 LREHIVPGIFSYDYLNKLAFGTKLETMSTGRCITV 38 LREHIVPG+F+ DYL KLAFGTK+ET+S G CITV Sbjct: 118 LREHIVPGLFTIDYLRKLAFGTKIETLSPGHCITV 152 >ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355508320|gb|AES89462.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] Length = 454 Score = 95.1 bits (235), Expect = 5e-18 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 3/95 (3%) Frame = -3 Query: 313 ILTTLGFQELAVAVPSLSDSAYYT---WNGPSTVFAPTDDXXXXXXXXXXXXXXXXVPQI 143 IL+ LGF ELA A P+LSD+A T W GP T+FAP+D VP + Sbjct: 63 ILSHLGFHELATAAPTLSDAATTTSLAWTGPFTIFAPSD-------ASIRTCFSCSVPNL 115 Query: 142 LREHIVPGIFSYDYLNKLAFGTKLETMSTGRCITV 38 LREHIVPGIF+ +YL +LAFGTK+ET+S GRC+TV Sbjct: 116 LREHIVPGIFTIEYLRRLAFGTKIETLSPGRCVTV 150