BLASTX nr result

ID: Coptis25_contig00029067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029067
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531652.1| conserved hypothetical protein [Ricinus comm...    86   9e-15
ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|2...    79   8e-13
ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777...    69   1e-09
emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]    67   4e-09

>ref|XP_002531652.1| conserved hypothetical protein [Ricinus communis]
           gi|223528710|gb|EEF30722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
 Frame = -3

Query: 551 QEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNAVSTGTLSSAEDI 372
           +ED E +EALS CDLPL  +  +    S+ +    +S   ELFEFF+  S+  + SAEDI
Sbjct: 13  EEDEEEEEALSLCDLPLEDDNEIPEMASRSHSRRSSSEPSELFEFFSNFSS-EMCSAEDI 71

Query: 371 VFCGKVFPYR--SPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRSQSSTKER 198
           +FCGK+ P++  SPP            + + +   R+S        L+    S+S++   
Sbjct: 72  IFCGKLIPFKDLSPPHQQ---------DKRHISFRRRS---ESLSGLHSSSVSRSNSINN 119

Query: 197 LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQRTPSARPRRRVL 18
           + R+++SLDY +L R  +SK T       S ER SS       + +  +    +PR  VL
Sbjct: 120 MMRNSRSLDYSRLERFPTSKTTTESD--NSMERNSS------LRSNMAKRTVVKPRWYVL 171

Query: 17  MFGLV 3
           MFG+V
Sbjct: 172 MFGVV 176


>ref|XP_002329633.1| predicted protein [Populus trichocarpa] gi|222870514|gb|EEF07645.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 71/192 (36%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
 Frame = -3

Query: 563 DHEFQEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNAVSTGTLSS 384
           D +  ++ E +EALS CD PL G        +  N    +S   E FEFF+ VS+  +SS
Sbjct: 18  DRDRDQEEEEEEALSLCDFPLQGRDKESPEIAAHNSARPSSEPAEFFEFFSDVSS-EMSS 76

Query: 383 AEDIVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRSQS--- 213
           AEDI+F GK+ P+  P  +       Q  EDQ+    R SF  R+  SL+++Q S S   
Sbjct: 77  AEDIIFHGKLVPFIEPYFT----PQNQSKEDQQ----RFSF-RRRCDSLSELQSSASRSN 127

Query: 212 STKER--LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQRTPSA 39
           STK    L R+++SLDY  L R  SSK    +  ++    + S    G+ K    RT S 
Sbjct: 128 STKNNIALMRNSRSLDYRNLERFPSSKKFSPELDIERSSSLKSIHARGEVK----RTTS- 182

Query: 38  RPRRRVLMFGLV 3
           +PR  +LMFG+V
Sbjct: 183 KPRWYLLMFGVV 194


>ref|XP_002325055.1| predicted protein [Populus trichocarpa] gi|222866489|gb|EEF03620.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
 Frame = -3

Query: 575 KQKGDHEFQEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNAVSTG 396
           +Q+  HE  E  E +EALS CD PL G      + +  +    +S   E FEFF+ +S+ 
Sbjct: 14  EQEHGHE-GEGEEEEEALSLCDFPLEGRNEESPNIAFHSGARSSSEPAEFFEFFSDLSS- 71

Query: 395 TLSSAEDIVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLNDVQRS- 219
            + SAEDI+F GK+ P + P  +       Q  ED++    R SF  R+  SL+++Q S 
Sbjct: 72  EMRSAEDIIFRGKLVPVKEPYFT----PQNQSKEDKQ----RISF-RRRCESLSELQSSV 122

Query: 218 --QSSTKER--LTRSTKSLDYGKLHRNSSSKLTRTDSLVQSDERISSGTCFGKCKFSEQR 51
              SS+K    L R+++SLDY KL R SSSK   ++  +   ER SS       K   ++
Sbjct: 123 CRSSSSKNNIGLMRNSRSLDYRKLERFSSSKKCSSELDI---ERSSSSLKSIHAKSDVKK 179

Query: 50  TPSARPRRRVLMFGLV 3
           T S +PR  +LMFG+V
Sbjct: 180 TGS-KPRWYLLMFGVV 194


>ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777782 [Glycine max]
          Length = 254

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
 Frame = -3

Query: 575 KQKGDHEFQEDSEAD--EALSFCDLPL---SGEYCVDNSDSKQNHDLQTSRDQ--ELFEF 417
           K   D E QE+ E +  EALS CDLPL   S    +D+   K+     +  D   E+F  
Sbjct: 2   KDSDDMESQEEEEEEREEALSLCDLPLNRNSRTPSLDDMSFKKILRPSSLPDHAGEIFNG 61

Query: 416 FNAVSTGTLSSAEDIVFCGKVFPYRS-PPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGS 240
           F++ S+  +  A+DI+FCGK+ P+++  PL N+        E+++    R     R+S S
Sbjct: 62  FSSSSSSDMCPADDIIFCGKLVPFKAEQPLKNLI-----AAEEEKSPARR-----RRSES 111

Query: 239 LNDVQRSQS-----STKERLTRSTKSLDYGKLHRNSSSKLTRTDS 120
           L+ V RS S      ++  + R++KSLDY +L  +++ ++ R  S
Sbjct: 112 LSSVTRSNSVSTFTGSRHLMMRNSKSLDYSRLRESAAPEVDRNSS 156


>emb|CAN66647.1| hypothetical protein VITISV_018785 [Vitis vinifera]
          Length = 273

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
 Frame = -3

Query: 587 EDITKQKGDHEFQEDSEADEALSFCDLPLSGEYCVDNSDSKQNHDLQTSRDQELFEFFNA 408
           ED  ++  + +  +  E+ E LS CDLP+ G+   D  DS ++ D  +S DQE FEFF+ 
Sbjct: 4   EDPIQKTWEDDSSDLDESVETLSLCDLPMYGDIGGDWDDSFKD-DQSSSSDQEFFEFFSE 62

Query: 407 VSTGTLS-SAEDIVFCGKVFPYRSPPLSNITNKTTQCIEDQRLDIPRKSFLHRKSGSLND 231
             T + S +AE+IVFCGK+  Y+  P+     + TQ +ED+      K     K G L  
Sbjct: 63  DFTASTSPAAENIVFCGKLITYKKLPVC----EDTQKLEDK----TEKKQQQPKKGGL-- 112

Query: 230 VQRSQSSTKERLTRSTKSLDYG-----KLHRNSSSK 138
           +QR   S K      +KS+D       KL +  SSK
Sbjct: 113 LQRGLKSFKRGKESRSKSMDGSHGKGLKLQQAPSSK 148


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