BLASTX nr result

ID: Coptis25_contig00029065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029065
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
           gi|223543465|gb|EEF44996.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 401

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
 Frame = -2

Query: 294 SEEFEMSGIMSKLPIEIFFDILSRLPIESLSHCRWVSKAWYNAIKDPCFIELQHTKVIHD 115
           SE FE      KLP EI+FDILSR PI SL  C+ VS+ WY ++++P    +   +    
Sbjct: 16  SESFE------KLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAEQ 69

Query: 114 NCYCVIFYD---KFEVDYHLVSNEDLEALETVAIP 19
           N  C++F+    + +++   V + +   L+T+  P
Sbjct: 70  N-LCLLFFSDWPRSKLELVQVEHPEPRKLKTLKTP 103


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