BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029063
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   585   e-165
emb|CBI38018.3| unnamed protein product [Vitis vinifera]              568   e-160
ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_003537854.1| PREDICTED: DNA replication licensing factor ...   548   e-153
gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japo...   547   e-153

>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  585 bits (1508), Expect = e-165
 Identities = 293/339 (86%), Positives = 313/339 (92%)
 Frame = -2

Query: 1017 TGIYRAMTVRVGPTQRTIKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSP 838
            TGIYRAM+VRVGPTQRT+KSLFKTY+DCLHLKK D SRM AEDPME ++GSG  ++DT  
Sbjct: 353  TGIYRAMSVRVGPTQRTVKSLFKTYIDCLHLKKTDKSRMQAEDPMEVENGSGRNEEDTLL 412

Query: 837  EYXXXXXXXXXXXXQPDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRG 658
             Y            QPDIYD+LTRSLAPNIWELDDVK+GLLCQLFGG+ALKLPSGA+FRG
Sbjct: 413  GYEDKVAQLKELSKQPDIYDRLTRSLAPNIWELDDVKKGLLCQLFGGSALKLPSGASFRG 472

Query: 657  DINILLVGDPGTSKSQLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 478
            DINILLVGDPGTSKSQLLQYIHKL+PRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA
Sbjct: 473  DINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 532

Query: 477  LVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 298
            LVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS
Sbjct: 533  LVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 592

Query: 297  RYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVL 118
            RYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDVL
Sbjct: 593  RYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDVL 652

Query: 117  DIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRG 1
            D+PTLTAY+SYAR+HI PKLSDEAAEEL R YVEMRRRG
Sbjct: 653  DLPTLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRG 691


>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  568 bits (1464), Expect = e-160
 Identities = 288/339 (84%), Positives = 307/339 (90%)
 Frame = -2

Query: 1017 TGIYRAMTVRVGPTQRTIKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSP 838
            TGIYRAM+VRVGPTQRT      TY+DCLHLKK D SRM AEDPME ++GSG  ++DT  
Sbjct: 353  TGIYRAMSVRVGPTQRT------TYIDCLHLKKTDKSRMQAEDPMEVENGSGRNEEDTLL 406

Query: 837  EYXXXXXXXXXXXXQPDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRG 658
             Y            QPDIYD+LTRSLAPNIWELDDVK+GLLCQLFGG+ALKLPSGA+FRG
Sbjct: 407  GYEDKVAQLKELSKQPDIYDRLTRSLAPNIWELDDVKKGLLCQLFGGSALKLPSGASFRG 466

Query: 657  DINILLVGDPGTSKSQLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 478
            DINILLVGDPGTSKSQLLQYIHKL+PRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA
Sbjct: 467  DINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 526

Query: 477  LVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 298
            LVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS
Sbjct: 527  LVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 586

Query: 297  RYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVL 118
            RYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADE  DRRLAKHIVALHFENPE+++QDVL
Sbjct: 587  RYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVALHFENPESLEQDVL 646

Query: 117  DIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRG 1
            D+PTLTAY+SYAR+HI PKLSDEAAEEL R YVEMRRRG
Sbjct: 647  DLPTLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRG 685


>ref|XP_002313023.1| predicted protein [Populus trichocarpa] gi|222849431|gb|EEE86978.1|
            predicted protein [Populus trichocarpa]
          Length = 720

 Score =  560 bits (1444), Expect = e-157
 Identities = 286/341 (83%), Positives = 308/341 (90%), Gaps = 2/341 (0%)
 Frame = -2

Query: 1017 TGIYRAMTVRVGPTQRTIKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGN--VDKDT 844
            TGIYRAM+VRVGPTQRT+KSLFKTYVDCLH+KK D SRM AEDPM+ D+G+ +  +++D 
Sbjct: 261  TGIYRAMSVRVGPTQRTVKSLFKTYVDCLHIKKTDKSRMLAEDPMDVDNGNASRRIEED- 319

Query: 843  SPEYXXXXXXXXXXXXQPDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATF 664
                            QPDIYD+LTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGA+F
Sbjct: 320  ------FHFDEAKLSRQPDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGASF 373

Query: 663  RGDINILLVGDPGTSKSQLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPETGETVLES 484
            RGDINILLVGDPGTSKSQLLQYIHKL+PRGIYTSGRGSSAVGLTAYV+KDPETGETVLES
Sbjct: 374  RGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVSKDPETGETVLES 433

Query: 483  GALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPS 304
            GALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANP 
Sbjct: 434  GALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPI 493

Query: 303  GSRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQD 124
            GSRYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADEH DR LAKHIV+LHFENPE+   D
Sbjct: 494  GSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEHTDRHLAKHIVSLHFENPESAVHD 553

Query: 123  VLDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRG 1
            VLDI TLTAY+SYAR++I+P+LSDEAAEEL R YVEMRRRG
Sbjct: 554  VLDIATLTAYVSYARKYIQPQLSDEAAEELTRGYVEMRRRG 594


>ref|XP_003537854.1| PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max]
          Length = 835

 Score =  548 bits (1411), Expect = e-153
 Identities = 278/339 (82%), Positives = 299/339 (88%)
 Frame = -2

Query: 1017 TGIYRAMTVRVGPTQRTIKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSP 838
            TGIYRAM+VR+GPTQRT+KSLFKTY+DCLH+KK D SRM  ED M+ D    N +     
Sbjct: 351  TGIYRAMSVRIGPTQRTVKSLFKTYIDCLHIKKTDKSRMLVEDAMDVDGQDKNAEVLFDE 410

Query: 837  EYXXXXXXXXXXXXQPDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFRG 658
            E             +PDIY+ LT+S+APNIWELDDVK+GLLCQLFGGNALKL SGA FRG
Sbjct: 411  E---KVAQLKELSKRPDIYEILTKSMAPNIWELDDVKKGLLCQLFGGNALKLASGANFRG 467

Query: 657  DINILLVGDPGTSKSQLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 478
            DINILLVGDPGTSKSQLLQYIHKL+PRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA
Sbjct: 468  DINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGA 527

Query: 477  LVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 298
            LVLSDRGICCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS
Sbjct: 528  LVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 587

Query: 297  RYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDVL 118
            RYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADE  DRRLAKHIV+LHFENPE V+QDVL
Sbjct: 588  RYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEQTDRRLAKHIVSLHFENPENVEQDVL 647

Query: 117  DIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRG 1
            DI TLT Y+SYAR+HI P+LSDEAAEEL R YVE+R+RG
Sbjct: 648  DISTLTDYVSYARKHIHPQLSDEAAEELTRGYVEIRKRG 686


>gb|EEE54765.1| hypothetical protein OsJ_02146 [Oryza sativa Japonica Group]
          Length = 862

 Score =  547 bits (1409), Expect = e-153
 Identities = 273/340 (80%), Positives = 304/340 (89%), Gaps = 1/340 (0%)
 Frame = -2

Query: 1017 TGIYRAMTVRVGPTQRTIKSLFKTYVDCLHLKKNDTSRMDAEDPMEFDDGSGNVDKDTSP 838
            TGIYRAM++RVGPTQRT+KS+FKTY+DCLH+KK D SR+  ED ME D+ + N  K T  
Sbjct: 377  TGIYRAMSIRVGPTQRTVKSIFKTYIDCLHIKKTDKSRLHVEDSMETDNPNAN--KTTED 434

Query: 837  EYXXXXXXXXXXXXQ-PDIYDKLTRSLAPNIWELDDVKRGLLCQLFGGNALKLPSGATFR 661
            ++            + PDIYD+LTRSLAPNIWELDDVKRGLLCQLFGGNAL+LPSGA+FR
Sbjct: 435  DFLRDKVEKLKELSKLPDIYDRLTRSLAPNIWELDDVKRGLLCQLFGGNALRLPSGASFR 494

Query: 660  GDINILLVGDPGTSKSQLLQYIHKLAPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESG 481
            GDINILLVGDPGTSKSQLLQY+HKL+PRGIYTSGRGSSAVGLTAYVTKDPETGETVLESG
Sbjct: 495  GDINILLVGDPGTSKSQLLQYMHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESG 554

Query: 480  ALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 301
            ALVLSD+G+CCIDEFDKMS+NARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANP+ 
Sbjct: 555  ALVLSDKGVCCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPTE 614

Query: 300  SRYNPRLSVIDNIHLPPTLLSRFDLIYLMLDKADEHMDRRLAKHIVALHFENPETVQQDV 121
            SRYNPRLSVIDNIHLPPTLLSRFDLIYL+LDKADE  DRRLAKHIV+LHFENP   + +V
Sbjct: 615  SRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPNIEELEV 674

Query: 120  LDIPTLTAYLSYARRHIRPKLSDEAAEELIRRYVEMRRRG 1
            LD+PTL AY+SYAR+HI+P+LSDEAAEEL R YVEMR+RG
Sbjct: 675  LDLPTLVAYISYARKHIQPQLSDEAAEELTRGYVEMRKRG 714