BLASTX nr result

ID: Coptis25_contig00029058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029058
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
ref|XP_003595844.1| hypothetical protein MTR_2g062470 [Medicago ...   103   3e-20
emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]    99   9e-19
ref|XP_002299614.1| predicted protein [Populus trichocarpa] gi|2...    96   7e-18
ref|XP_003603597.1| hypothetical protein MTR_3g109470 [Medicago ...    96   9e-18

>ref|XP_002308622.1| predicted protein [Populus trichocarpa] gi|222854598|gb|EEE92145.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  106 bits (265), Expect = 5e-21
 Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 32/263 (12%)
 Frame = +3

Query: 93  LDVLNGKCNVVCTSKDRRNPQPSEGELKRADYIFYRTFDVGKFKISDKFEDEIAGVDVRN 272
           L+ + GKCNVVC+SKD RNPQPS+ EL+ AD++FYRTFDVG  +I DK +D+IAG++V+ 
Sbjct: 115 LEAIAGKCNVVCSSKDSRNPQPSDEELQEADFVFYRTFDVGNCRILDKIDDKIAGIEVKF 174

Query: 273 IFNRKKGHRLANLPKIQAKASCGEAPVVVENPASVFNK---YRVKDERNSSHPVENK-DK 440
           + NR      + +PK+ +K        V  N   +  +   Y  +   +SSH   N+  K
Sbjct: 175 LLNRVGNQSSSGVPKLDSKKKEVSGNFVATNDTRILTRTESYLGEKATSSSHVKFNEVTK 234

Query: 441 LNPSQDSKHFGGIQYVSINNNGSLSDSARALKEQNVPAVREQKSMVSVAENLTIDSDEGK 620
           +N         G    S +    +SD   +L  Q         S + + E   +D  EG 
Sbjct: 235 INDRLVDN--SGETASSSSKVKQISDIKPSLANQKCSPGENSASNLGLGEMTKVDEQEGI 292

Query: 621 PRSPVRPS-----------------------EYKRKAVEAGDLFGMGRNKVKFGEEAK-- 725
           P   +  S                       E  + A + GDL      K K  + AK  
Sbjct: 293 PSDIIASSSKDDVGWSESKVDKVFADQVLIEEKVKVAKDCGDLDDRPSKKAKLDDLAKAS 352

Query: 726 ---REKGIETISQVSKVTRKQEI 785
              + KG++ +S  S  +  + +
Sbjct: 353 YDNKVKGVQKVSHDSNGSNSKSV 375


>ref|XP_003595844.1| hypothetical protein MTR_2g062470 [Medicago truncatula]
           gi|355484892|gb|AES66095.1| hypothetical protein
           MTR_2g062470 [Medicago truncatula]
          Length = 582

 Score =  103 bits (258), Expect = 3e-20
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 21/260 (8%)
 Frame = +3

Query: 93  LDVLNGKCNVVCTSKDRRNPQPSEGELKRADYIFYRTFDVGKFKISDKFEDEIAGVDVRN 272
           L+ + GKCNVVCTS+DRRNP+PSE ELKRAD++F  TFDV +  I DKF D+I G +V  
Sbjct: 123 LESILGKCNVVCTSEDRRNPKPSETELKRADFLFKCTFDVDRCVIDDKFPDKIDGAEVEL 182

Query: 273 IFNRKKGHRLANLPKIQAKASCGEAPVVVENPASVFNKY-RVKDE-RNSSHP-------V 425
            FN+K   +  N   ++      + P  ++        Y  +KDE +  + P       V
Sbjct: 183 FFNKKGAKKTGNNLHLET----NKMPQQIKKTKIKMKTYENIKDEVKTKTAPSDILRCKV 238

Query: 426 ENKDKLNPSQDSKHFGGIQYVSINNNGSLSDSARALKEQNVPAVREQKSMVSVAENLTID 605
           E+KD+L  S++         + +  +G+L D    +K++     +   S +        D
Sbjct: 239 EDKDELRTSENVS-----LKIKMTTSGNLKDE---VKDEVKTKSKTAPSDIMRWNGENKD 290

Query: 606 SDEGKPRSPVRPSEY-------KRKAVEAGDLFGMGRN---KVKFG--EEAKREKGIETI 749
            DE +    V P +        K K VE     G   N   K +F   EE + ++ ++  
Sbjct: 291 KDELRTSENVSPMKLLDSYPFKKMKIVEEKSTIGHSSNSQMKDEFDEKEEFRHDESVKPT 350

Query: 750 SQVSKVTRKQEIDRSNWFKE 809
            +V++VT +   ++  WFK+
Sbjct: 351 RKVTEVTERPNAEKRKWFKK 370


>emb|CAN79963.1| hypothetical protein VITISV_024480 [Vitis vinifera]
          Length = 385

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
 Frame = +3

Query: 96  DVLNGKCNVVCTSKDRRNPQPSEGELKRADYIFYRTFDVGKFKISDKFEDEIAGVDVRNI 275
           + L GKC VVCTS D+RNP+ S+ EL+ ADYIFYRTFD+G  KISD F D I G+ V   
Sbjct: 134 EALGGKCKVVCTSNDKRNPRVSQVELREADYIFYRTFDIGSLKISDNFADLIDGIKVEYF 193

Query: 276 FNRKKGHRLANLPKIQAKASCGEAPV--VVENPASVFNKYRVKDERNSSHPVENKDKLNP 449
           FNRKK  +L N   I+A        +    ++  S  + + +K           K KL  
Sbjct: 194 FNRKKDQKLLNPRNIKANLEVRTQTIDSTSKSDMSTLDMWPLK-----------KRKLLL 242

Query: 450 SQDSKHFGGIQYVSINNNGSLSDSARALKEQNVPAVREQKSM------VSVAENLTIDSD 611
           S + +  G     S  +      + R L    + + R+ + +      +   E   ++  
Sbjct: 243 STEKELPGLGPNTSPPSELGERSNMRTLLPLRIASKRDPEKLTVXLPGLPKHEEKNLNPK 302

Query: 612 EGKPRSPVRPSEYK--RKAVEAGDLFGMGRNKVKFGEEAKREKGIETISQVSKVTRKQEI 785
           +   ++  RP + K   KA+   D         K   +  + +GI+  +     TR+ + 
Sbjct: 303 DSTSQNRARPKKVKFDEKAITIPD---------KAASQPAQNEGIKARTGSMDDTRRLDA 353

Query: 786 DRSNWFKE 809
           DR +WFKE
Sbjct: 354 DRRSWFKE 361


>ref|XP_002299614.1| predicted protein [Populus trichocarpa] gi|222846872|gb|EEE84419.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
 Frame = +3

Query: 108 GKCNVVCTSKDRRNPQPSEGELKRADYIFYRTFDVGKFKISDKFEDEIAGVDVRNIFNRK 287
           GKCNVVC S D+RNPQ SE +L+ ADYIFYR+FDVG  +IS+ F D+I G  V   FN++
Sbjct: 123 GKCNVVCASNDQRNPQASEQQLEMADYIFYRSFDVGTCRISESFADQICGFKVELYFNKR 182

Query: 288 KGHRLANLPKIQAKAS--CGEAPVVVENPASVFNKYRVKDERNS-SHPVENKDKLNPSQD 458
           +   L N   ++ K     G++ +V+E      N++ VKD ++  S PV  + K   + D
Sbjct: 183 RNQMLGNHGTLEPKVKELTGKS-IVLEK----MNRHAVKDGKSGRSSPVVKESKTRTNMD 237

Query: 459 SK-HFGGIQYVS 491
            K HF    Y S
Sbjct: 238 DKQHFSNKPYKS 249


>ref|XP_003603597.1| hypothetical protein MTR_3g109470 [Medicago truncatula]
           gi|355492645|gb|AES73848.1| hypothetical protein
           MTR_3g109470 [Medicago truncatula]
          Length = 672

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 9/174 (5%)
 Frame = +3

Query: 93  LDVLNGKCNVVCTSKDRRNPQPSEGELKRADYIFYRTFDVGKFKISDKFEDEIAGVDVRN 272
           L+ + GKCNVVC SKD RNP P + +L+ AD++ YR FDVG+ KI DK +D+IAG++V+N
Sbjct: 115 LEAIAGKCNVVCISKDNRNPPPPDKDLQNADFVCYRFFDVGQHKILDKVDDKIAGIEVKN 174

Query: 273 IFNRKKGHRLANLPKIQAKASCGEAPVVVENPASVFNKYRVKDERNSSHPVENKD----- 437
           IFN     +L    K+          V   N A       +  ++N+ H +E  D     
Sbjct: 175 IFNNLYSQKLGGFSKLGLDEKQVGVKVTESNEA-----VALSSKKNNKHLIEKLDGKCFD 229

Query: 438 --KLNPSQDSKHFG--GIQYVSINNNGSLSDSARALKEQNVPAVREQKSMVSVA 587
                PS   K     G++  S +N G  S S    +++ +P  +E+++ V+ A
Sbjct: 230 NVDFKPSLGEKRTSSLGLKDTSKSNGGLHSIS----RDKTLPQAKEKENGVNKA 279


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