BLASTX nr result

ID: Coptis25_contig00029019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029019
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320123.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002302580.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48
ref|XP_002320788.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_002273655.1| PREDICTED: putative ripening-related protein...   191   7e-47
ref|XP_002302579.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46

>ref|XP_002320123.1| predicted protein [Populus trichocarpa] gi|222860896|gb|EEE98438.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  196 bits (498), Expect = 2e-48
 Identities = 89/128 (69%), Positives = 101/128 (78%)
 Frame = -1

Query: 560 FKCSPPLSPITGGANAVLTLNSFEKXXXXXGPSECDGKYHSDDKPVVALSTGWYNKGSRC 381
           +KCSPP S  T    A LTLNSF+K      PSECD +YHSDD PVVALSTGWY+ G+RC
Sbjct: 24  YKCSPPASSST---KATLTLNSFQKGGDGGAPSECDNQYHSDDTPVVALSTGWYSNGNRC 80

Query: 380 HKMINIHANGRSVKAMVIDECDSTQGCDAEHDYQPPCPHNIVDASKAVWKALGVPKKDWG 201
              INIH NG+SVKAMV+DECDST GCD++HDYQPPCP+NIVDASKAVWKALGVP+ DWG
Sbjct: 81  LNYINIHGNGKSVKAMVVDECDSTMGCDSDHDYQPPCPNNIVDASKAVWKALGVPESDWG 140

Query: 200 YTHITWSE 177
              I WS+
Sbjct: 141 EMDIYWSD 148


>ref|XP_002302580.1| predicted protein [Populus trichocarpa] gi|222844306|gb|EEE81853.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  195 bits (496), Expect = 4e-48
 Identities = 90/128 (70%), Positives = 99/128 (77%)
 Frame = -1

Query: 560 FKCSPPLSPITGGANAVLTLNSFEKXXXXXGPSECDGKYHSDDKPVVALSTGWYNKGSRC 381
           FKCSP    +TG   A LTLNSFEK      PSECD  YHSDD PVVALSTGWYN G+RC
Sbjct: 63  FKCSPG---VTGRTKATLTLNSFEKGGDGGAPSECDNHYHSDDTPVVALSTGWYNHGNRC 119

Query: 380 HKMINIHANGRSVKAMVIDECDSTQGCDAEHDYQPPCPHNIVDASKAVWKALGVPKKDWG 201
              INIH NG+SVKAMV+DECDST GCD++HDYQPPC +NIVDASKAVWKALGVP+ DWG
Sbjct: 120 LNFINIHGNGKSVKAMVVDECDSTMGCDSDHDYQPPCANNIVDASKAVWKALGVPESDWG 179

Query: 200 YTHITWSE 177
              I WS+
Sbjct: 180 GMDIYWSD 187


>ref|XP_002320788.1| predicted protein [Populus trichocarpa] gi|222861561|gb|EEE99103.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  194 bits (492), Expect = 1e-47
 Identities = 88/128 (68%), Positives = 99/128 (77%)
 Frame = -1

Query: 560 FKCSPPLSPITGGANAVLTLNSFEKXXXXXGPSECDGKYHSDDKPVVALSTGWYNKGSRC 381
           FKCSP    +T    A LTLNSF+K      PSECD +YHSDD PVVALSTGWYN G+RC
Sbjct: 24  FKCSPR---VTSSTKATLTLNSFQKGGDGGAPSECDNQYHSDDTPVVALSTGWYNNGNRC 80

Query: 380 HKMINIHANGRSVKAMVIDECDSTQGCDAEHDYQPPCPHNIVDASKAVWKALGVPKKDWG 201
              INIH NG+SVKAMV+DECDST GCD++HDYQPPC +NIVDASKAVWKALGVP+ DWG
Sbjct: 81  LNSINIHGNGKSVKAMVVDECDSTMGCDSDHDYQPPCANNIVDASKAVWKALGVPESDWG 140

Query: 200 YTHITWSE 177
              I WS+
Sbjct: 141 EMDIYWSD 148


>ref|XP_002273655.1| PREDICTED: putative ripening-related protein 2-like [Vitis
           vinifera]
          Length = 188

 Score =  191 bits (485), Expect = 7e-47
 Identities = 91/128 (71%), Positives = 99/128 (77%)
 Frame = -1

Query: 560 FKCSPPLSPITGGANAVLTLNSFEKXXXXXGPSECDGKYHSDDKPVVALSTGWYNKGSRC 381
           +KCSP +S  T    AVLTLNSFEK      PSECD KYHSDD PVVALSTGWYNKGSRC
Sbjct: 63  YKCSPAVSSHT---KAVLTLNSFEKGGDGGAPSECDRKYHSDDTPVVALSTGWYNKGSRC 119

Query: 380 HKMINIHANGRSVKAMVIDECDSTQGCDAEHDYQPPCPHNIVDASKAVWKALGVPKKDWG 201
              I I A GRS+ AMV+DECDST GCD +HDYQPPCP+NIVDASKAVW+ALGVP  DWG
Sbjct: 120 LNNITISARGRSMVAMVVDECDSTMGCDEDHDYQPPCPNNIVDASKAVWEALGVPLADWG 179

Query: 200 YTHITWSE 177
              ITWS+
Sbjct: 180 ELDITWSD 187


>ref|XP_002302579.1| predicted protein [Populus trichocarpa] gi|222844305|gb|EEE81852.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  190 bits (483), Expect = 1e-46
 Identities = 88/128 (68%), Positives = 99/128 (77%)
 Frame = -1

Query: 560 FKCSPPLSPITGGANAVLTLNSFEKXXXXXGPSECDGKYHSDDKPVVALSTGWYNKGSRC 381
           +KCSP +S  T    A LTLNSFE       PSECD +YHSDD PVVALSTGWYN GSRC
Sbjct: 63  YKCSPLVSSHT---KATLTLNSFEGGGDGGAPSECDNQYHSDDTPVVALSTGWYNHGSRC 119

Query: 380 HKMINIHANGRSVKAMVIDECDSTQGCDAEHDYQPPCPHNIVDASKAVWKALGVPKKDWG 201
              +NIH NG+SVKAMV+DECDST GCD++HDYQPPC +NIVDASKAVWKALGVP+ DWG
Sbjct: 120 LNYVNIHGNGKSVKAMVVDECDSTMGCDSDHDYQPPCANNIVDASKAVWKALGVPESDWG 179

Query: 200 YTHITWSE 177
              I WS+
Sbjct: 180 EMDIYWSD 187


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