BLASTX nr result

ID: Coptis25_contig00029013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029013
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM11099.1| ABC protein [Coptis japonica]                         117   1e-24
ref|XP_003520772.1| PREDICTED: ABC transporter B family member 1...   102   2e-20
ref|XP_003541332.1| PREDICTED: ABC transporter B family member 1...    99   4e-19
ref|XP_002519337.1| multidrug resistance protein 1, 2, putative ...    96   4e-18
dbj|BAM33973.1| ATP-binding cassette protein [Lotus japonicus]         95   7e-18

>dbj|BAM11099.1| ABC protein [Coptis japonica]
          Length = 1288

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/98 (56%), Positives = 72/98 (73%)
 Frame = -2

Query: 295 IELNTTEASENTYEVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFY 116
           IEL TTEAS+  Y+VPLHRL ++NKPE  +LILG  ++VINGS+LP+ GV  S +I TFY
Sbjct: 694 IELTTTEASQQPYKVPLHRLAYLNKPEFPLLILGTFASVINGSILPLVGVLFSDLIYTFY 753

Query: 115 EPAVELQKDSKVLMWTFVSLRFVSLMASTGRSYFFAIA 2
           EP   L  DS  L+W F++L F+  +A+TGR YFF +A
Sbjct: 754 EPRNRLLSDSHRLLWMFIALGFIGFIAATGRLYFFGVA 791


>ref|XP_003520772.1| PREDICTED: ABC transporter B family member 11-like [Glycine max]
          Length = 1282

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/97 (50%), Positives = 71/97 (73%)
 Frame = -2

Query: 292 ELNTTEASENTYEVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFYE 113
           EL  ++  E + EVPL RL  +NKPE+ +L++GCV+A+ NG++ PIFGV +S +I+TF++
Sbjct: 686 ELEYSQPQEKSPEVPLRRLASLNKPEIPVLLIGCVAAIANGTIFPIFGVLLSSVIKTFFK 745

Query: 112 PAVELQKDSKVLMWTFVSLRFVSLMASTGRSYFFAIA 2
           P  E++KDSK     FV+L F SL+A   RSYFFA+A
Sbjct: 746 PFPEMKKDSKFWALMFVTLGFGSLLAIPARSYFFAMA 782


>ref|XP_003541332.1| PREDICTED: ABC transporter B family member 11-like [Glycine max]
          Length = 1930

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/85 (56%), Positives = 63/85 (74%)
 Frame = -2

Query: 256 EVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFYEPAVELQKDSKVL 77
           EVPL+RL ++NKPE+ +L++G VSAVI G +LP+FG+ +S+MI  FYEPA EL+KDSKV 
Sbjct: 693 EVPLYRLAYLNKPEILVLLMGTVSAVITGVILPVFGLLLSKMISIFYEPAHELRKDSKVW 752

Query: 76  MWTFVSLRFVSLMASTGRSYFFAIA 2
              FV L  VS +   GR YFF +A
Sbjct: 753 AIVFVGLGAVSFLVYPGRFYFFGVA 777



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = -2

Query: 256  EVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFYEPAVELQKDSKVL 77
            EVPL+RL ++NKPE  +L+ G ++A+ING LLPI  +F+S+MI  FYEPA EL+KDSK+ 
Sbjct: 1347 EVPLYRLAYLNKPETPVLLAGSIAAIINGVLLPIVAIFMSKMISIFYEPADELRKDSKLW 1406

Query: 76   MWTFVSLRFVSLMASTGRSYFFAIA 2
               FV L  VS +    R Y F +A
Sbjct: 1407 ALLFVVLGVVSFIMPPCRFYLFGVA 1431


>ref|XP_002519337.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223541652|gb|EEF43201.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1260

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/85 (50%), Positives = 65/85 (76%)
 Frame = -2

Query: 256 EVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFYEPAVELQKDSKVL 77
           ++PLHRL H+N+PE+ +L+LG  +A  NG ++P FGV +S MI+TF+EPA +LQKDS++ 
Sbjct: 709 KIPLHRLAHLNRPEIPVLLLGSAAAAANGVVMPFFGVLVSSMIKTFFEPADKLQKDSRLW 768

Query: 76  MWTFVSLRFVSLMASTGRSYFFAIA 2
            + F+ L  +SL+A   RS+FFA+A
Sbjct: 769 AFMFLGLASLSLLAYPLRSFFFAVA 793


>dbj|BAM33973.1| ATP-binding cassette protein [Lotus japonicus]
          Length = 1254

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/89 (50%), Positives = 63/89 (70%)
 Frame = -2

Query: 268 ENTYEVPLHRLFHMNKPELQMLILGCVSAVINGSLLPIFGVFISRMIQTFYEPAVELQKD 89
           E + EVPL RL  +NKPE+  L++GCV+A+ NG++LPI+GV +S +I+T YEP  +++KD
Sbjct: 666 EKSQEVPLLRLASLNKPEIPALLMGCVAAIANGAILPIYGVLLSSVIKTLYEPFPDMKKD 725

Query: 88  SKVLMWTFVSLRFVSLMASTGRSYFFAIA 2
           SK     FV L   SLMA   R YFF++A
Sbjct: 726 SKFWSLMFVVLGIASLMAIPARCYFFSVA 754


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