BLASTX nr result

ID: Coptis25_contig00029012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029012
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002281172.1| PREDICTED: protein yeeZ [Vitis vinifera] gi|...   179   2e-43
emb|CAN76003.1| hypothetical protein VITISV_043063 [Vitis vinifera]   179   2e-43
gb|EEE54277.1| hypothetical protein OsJ_01183 [Oryza sativa Japo...   178   5e-43
ref|NP_564095.1| nucleoside-diphosphate-sugar epimerase domain-c...   175   3e-42

>ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|222842474|gb|EEE80021.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  182 bits (463), Expect = 2e-44
 Identities = 91/149 (61%), Positives = 107/149 (71%)
 Frame = -3

Query: 450 VLGTCTSTTKKKKLEEMGLGVQVFNSSDNEVSCLNSLTDATHLLVSIPPITSGDQVLDRH 271
           V GTCTS TKKK LEE G  V + +++  E+S LN+L   THLLVSIPP+      + +H
Sbjct: 83  VTGTCTSKTKKKHLEEKGFHVHLLDANQPELSTLNALKCYTHLLVSIPPVGCAGDPMLQH 142

Query: 270 WNLLQSKLCNENLQWLCYLSSTGVYGDCGGAWADEDYLTKPMSDSGKARLVAEKQWLNLG 91
             LL+S L + NLQWLCYLSST VYG C GAW DEDY T P S+  K RL AE+ WLNLG
Sbjct: 143 EELLRSTLLDGNLQWLCYLSSTSVYGHCDGAWVDEDYPTSPTSELAKLRLDAEEGWLNLG 202

Query: 90  HDLGVSVQLFRLGGIYGPGRSALDTILKQ 4
             LG S Q+FRLGGIYGPGRSA+DTI+KQ
Sbjct: 203 QSLGFSTQVFRLGGIYGPGRSAVDTIIKQ 231


>ref|XP_002281172.1| PREDICTED: protein yeeZ [Vitis vinifera]
           gi|302142549|emb|CBI19752.3| unnamed protein product
           [Vitis vinifera]
          Length = 351

 Score =  179 bits (454), Expect = 2e-43
 Identities = 88/150 (58%), Positives = 113/150 (75%), Gaps = 1/150 (0%)
 Frame = -3

Query: 450 VLGTCTSTTKKKKLEEMGLGVQVFNSSDNEVSCLNSLTDATHLLVSIPPITS-GDQVLDR 274
           V GTCTS  KKKKLEE G  + +F++++ E+  LN+L  +THLLVSIPP+   GD +L +
Sbjct: 82  VSGTCTSAFKKKKLEERGFNIYLFDANEPELGVLNALKYSTHLLVSIPPVVGIGDPIL-Q 140

Query: 273 HWNLLQSKLCNENLQWLCYLSSTGVYGDCGGAWADEDYLTKPMSDSGKARLVAEKQWLNL 94
           H   L+S++ + +LQWLCYLSST VYG+CGG   DEDY   P S+S K RL AEK W +L
Sbjct: 141 HDKFLKSRIMDGDLQWLCYLSSTSVYGNCGGELVDEDYPASPASESAKLRLAAEKGWSSL 200

Query: 93  GHDLGVSVQLFRLGGIYGPGRSALDTILKQ 4
           G +LG+S Q+FRLGGIYGPGRSA+DTI+KQ
Sbjct: 201 GSELGLSTQIFRLGGIYGPGRSAVDTIIKQ 230


>emb|CAN76003.1| hypothetical protein VITISV_043063 [Vitis vinifera]
          Length = 351

 Score =  179 bits (454), Expect = 2e-43
 Identities = 88/150 (58%), Positives = 113/150 (75%), Gaps = 1/150 (0%)
 Frame = -3

Query: 450 VLGTCTSTTKKKKLEEMGLGVQVFNSSDNEVSCLNSLTDATHLLVSIPPITS-GDQVLDR 274
           V GTCTS  KKKKLEE G  + +F++++ E+  LN+L  +THLLVSIPP+   GD +L +
Sbjct: 82  VSGTCTSAFKKKKLEERGFNIYLFDANEPELGVLNALKYSTHLLVSIPPVVGIGDPIL-Q 140

Query: 273 HWNLLQSKLCNENLQWLCYLSSTGVYGDCGGAWADEDYLTKPMSDSGKARLVAEKQWLNL 94
           H   L+S++ + +LQWLCYLSST VYG+CGG   DEDY   P S+S K RL AEK W +L
Sbjct: 141 HDKFLKSRIMDGDLQWLCYLSSTSVYGNCGGELVDEDYPASPASESAKLRLAAEKGWSSL 200

Query: 93  GHDLGVSVQLFRLGGIYGPGRSALDTILKQ 4
           G +LG+S Q+FRLGGIYGPGRSA+DTI+KQ
Sbjct: 201 GSELGLSTQIFRLGGIYGPGRSAVDTIIKQ 230


>gb|EEE54277.1| hypothetical protein OsJ_01183 [Oryza sativa Japonica Group]
          Length = 333

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/152 (57%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
 Frame = -3

Query: 453 KVLGTCTSTTKKKKLEEMGLGVQVFNSSDNEVSCLNSLTDATHLLVSIPPITS-GDQVLD 277
           +V GTCTS  KK +LE +G+   +F+++ + ++ L SL DATHLL+SIPPI   GD +L 
Sbjct: 52  RVSGTCTSPAKKTELEMLGMDASIFDATSSSLTNLRSLQDATHLLISIPPIPGIGDPLLS 111

Query: 276 RHWNLLQSKLCNENLQWLCYLSSTGVYGDCGGAWADEDYLTKPMSDSGKARLVAEKQWLN 97
            H NL Q+ L N NLQWLCYLSST VYGDCGGAW DED+   P ++S K R  AEK WLN
Sbjct: 112 SHSNL-QTTLSNSNLQWLCYLSSTSVYGDCGGAWVDEDHTVNPKTESVKLRYAAEKGWLN 170

Query: 96  LGHDLGVSVQLFRLGGIYGPGRSALDTILKQR 1
           +  DL +S  +FRLGGIYGPGRSA+DTI K +
Sbjct: 171 VIDDLDLSAFVFRLGGIYGPGRSAVDTIAKSK 202


>ref|NP_564095.1| nucleoside-diphosphate-sugar epimerase domain-containing protein
           [Arabidopsis thaliana] gi|109946403|gb|ABG48380.1|
           At1g19690 [Arabidopsis thaliana]
           gi|332191762|gb|AEE29883.1| nucleoside-diphosphate-sugar
           epimerase domain-containing protein [Arabidopsis
           thaliana]
          Length = 352

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/150 (57%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
 Frame = -3

Query: 450 VLGTCTSTTKKKKLEEMGLGVQVFNSSDNEVSCLNSLTDATHLLVSIPPITS-GDQVLDR 274
           V GTC S +KKK+ E+ G+ +  F++   E S L+S+ D THLL+SIPP+   GD +L R
Sbjct: 78  VSGTCRSDSKKKEWEKRGINLHPFSADSPEWSLLDSVKDYTHLLISIPPLADIGDPML-R 136

Query: 273 HWNLLQSKLCNENLQWLCYLSSTGVYGDCGGAWADEDYLTKPMSDSGKARLVAEKQWLNL 94
           +  L++ KL + NL+WLCYLSST VYGDCGGAW +E++L  P + S K RL AE+ WL+L
Sbjct: 137 NVELVRDKLSSGNLRWLCYLSSTSVYGDCGGAWVNENHLPNPKTQSAKVRLAAEQGWLSL 196

Query: 93  GHDLGVSVQLFRLGGIYGPGRSALDTILKQ 4
           G DLGVS Q+ RLGGIYGPGRSA+DT+LKQ
Sbjct: 197 GRDLGVSTQILRLGGIYGPGRSAIDTLLKQ 226


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