BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028999
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530214.1| pentatricopeptide repeat-containing protein,...    77   2e-12
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...    75   4e-12
emb|CBI28441.3| unnamed protein product [Vitis vinifera]               75   4e-12
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]    75   4e-12
ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530261|gb|EEF32161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 834

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/65 (52%), Positives = 49/65 (75%)
 Frame = -2

Query: 383 FTSSEEGRKKGREIHAFVVRNRLNDVKVSIGNELVNMYAKSGSIETLLTVF*LLSLKDLI 204
           FT  EEGR+KGRE+H F +R  LND+KV+IGN L+NMYAK G+++   +VF L++ +D +
Sbjct: 259 FTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAVDDARSVFRLMNDRDAV 318

Query: 203 SLNEI 189
           S N +
Sbjct: 319 SWNSM 323


>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 383 FTSSEEGRKKGREIHAFVVRNRLNDVKVSIGNELVNMYAKSGSIETLLTVF*LLSLKDLI 204
           F+  EEGR+KGRE+HA V+R  LND KV+IGN LVNMYAKSG+I    +VF L+  KD +
Sbjct: 395 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 454

Query: 203 SLNEI 189
           S N +
Sbjct: 455 SWNSL 459


>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 383 FTSSEEGRKKGREIHAFVVRNRLNDVKVSIGNELVNMYAKSGSIETLLTVF*LLSLKDLI 204
           F+  EEGR+KGRE+HA V+R  LND KV+IGN LVNMYAKSG+I    +VF L+  KD +
Sbjct: 313 FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 372

Query: 203 SLNEI 189
           S N +
Sbjct: 373 SWNSL 377


>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = -2

Query: 383  FTSSEEGRKKGREIHAFVVRNRLNDVKVSIGNELVNMYAKSGSIETLLTVF*LLSLKDLI 204
            F+  EEGR+KGRE+HA V+R  LND KV+IGN LVNMYAKSG+I    +VF L+  KD +
Sbjct: 868  FSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSV 927

Query: 203  SLNEI 189
            S N +
Sbjct: 928  SWNSL 932


>ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|222872247|gb|EEF09378.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = -2

Query: 383 FTSSEEGRKKGREIHAFVVRNRLNDVKVSIGNELVNMYAKSGSIETLLTVF*LLSLKDLI 204
           F   +EGR+KGRE+H + +R  LND KV++GN L+NMYAK G I+   +VF L+  KD +
Sbjct: 264 FALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSV 323

Query: 203 SLNEI 189
           S N +
Sbjct: 324 SWNSM 328