BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028995
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...    55   8e-06

>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
 Frame = -2

Query: 210 FLDPECNRRPHIRYVPHRLGLIRRRFGHILRPGVSSAIRY---EGQFPRERGDGWMEIEL 40
           +LD E  RR   + V  R+GL+ R  G I   G+ +++R    + ++P+ERGDGW+EIEL
Sbjct: 205 YLDAERGRRRRSQIVRRRIGLLNR--GRIF--GLQASLRNGESDCKYPKERGDGWLEIEL 260

Query: 39  GDFYNGQGEDG 7
           G+F+  +GEDG
Sbjct: 261 GEFFKKKGEDG 271


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/67 (41%), Positives = 39/67 (58%)
 Frame = -2

Query: 210 FLDPECNRRPHIRYVPHRLGLIRRRFGHILRPGVSSAIRYEGQFPRERGDGWMEIELGDF 31
           +LD E  RR    +V  R+GL  R    +  P    A    GQ+P++R DGW+EIELG+F
Sbjct: 207 YLDSERGRRQQYHFVSRRIGLFNR-CRIVGMPASEPARENNGQYPKKREDGWLEIELGEF 265

Query: 30  YNGQGED 10
           +  +GED
Sbjct: 266 FCKEGED 272


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
 Frame = -2

Query: 162 HRLGLIRRRFGHILRPGVSS------AIRYEGQFPRERGDGWMEIELGDFYNGQGEDG 7
           HR  L+RRR G   R  +        A    GQ P+ERGDGW+EIELG+F+  +GEDG
Sbjct: 205 HRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFCKEGEDG 262