BLASTX nr result
ID: Coptis25_contig00028993
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028993 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi... 183 1e-44 emb|CBI30210.3| unnamed protein product [Vitis vinifera] 183 1e-44 ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2... 177 6e-43 ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi... 174 7e-42 emb|CAB85500.1| putative protein [Arabidopsis thaliana] 163 1e-38 >ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like [Vitis vinifera] Length = 882 Score = 183 bits (464), Expect = 1e-44 Identities = 85/133 (63%), Positives = 109/133 (81%) Frame = -3 Query: 402 VVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEG 223 VV++FE+M +DVITWT M+ A+M+FG+ + AL+ F +MP ++ ISYNA+LSGFC NGEG Sbjct: 326 VVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEG 385 Query: 222 LQALKLFQGMLERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAAL 43 +AL F M+E G+EL+DFTLT ++NAC LL + +ISKQIHGF++KFGFGSN IEAAL Sbjct: 386 SKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAAL 445 Query: 42 LDMCTRCGRMAHA 4 LDMCTRCGRMA A Sbjct: 446 LDMCTRCGRMADA 458 Score = 85.9 bits (211), Expect = 3e-15 Identities = 39/118 (33%), Positives = 71/118 (60%) Frame = -3 Query: 372 KDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGM 193 +D+ +++A++K GMV +A K FV + + +SY A++SGF + QA+++F M Sbjct: 103 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 162 Query: 192 LERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCG 19 G+EL++F+ +I+ C L +E+ Q+H VIK GF + ++ AL+ + +CG Sbjct: 163 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCG 220 Score = 58.9 bits (141), Expect = 4e-07 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Frame = -3 Query: 330 KFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGMLE-RGMELSDFTLT 154 K G ++S L+ F +MP + S+N ++S +A +LF+ M G + FTL+ Sbjct: 218 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 277 Query: 153 SIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCGRMAH 7 +I+ A L+ + + ++IH VIK GF SN + AL+ T+CG + H Sbjct: 278 TILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKH 325 >emb|CBI30210.3| unnamed protein product [Vitis vinifera] Length = 900 Score = 183 bits (464), Expect = 1e-44 Identities = 85/133 (63%), Positives = 109/133 (81%) Frame = -3 Query: 402 VVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEG 223 VV++FE+M +DVITWT M+ A+M+FG+ + AL+ F +MP ++ ISYNA+LSGFC NGEG Sbjct: 344 VVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEG 403 Query: 222 LQALKLFQGMLERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAAL 43 +AL F M+E G+EL+DFTLT ++NAC LL + +ISKQIHGF++KFGFGSN IEAAL Sbjct: 404 SKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAAL 463 Query: 42 LDMCTRCGRMAHA 4 LDMCTRCGRMA A Sbjct: 464 LDMCTRCGRMADA 476 Score = 85.9 bits (211), Expect = 3e-15 Identities = 39/118 (33%), Positives = 71/118 (60%) Frame = -3 Query: 372 KDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGM 193 +D+ +++A++K GMV +A K FV + + +SY A++SGF + QA+++F M Sbjct: 121 EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRM 180 Query: 192 LERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCG 19 G+EL++F+ +I+ C L +E+ Q+H VIK GF + ++ AL+ + +CG Sbjct: 181 RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCG 238 Score = 58.9 bits (141), Expect = 4e-07 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Frame = -3 Query: 330 KFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGMLE-RGMELSDFTLT 154 K G ++S L+ F +MP + S+N ++S +A +LF+ M G + FTL+ Sbjct: 236 KCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLS 295 Query: 153 SIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCGRMAH 7 +I+ A L+ + + ++IH VIK GF SN + AL+ T+CG + H Sbjct: 296 TILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKH 343 >ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa] Length = 915 Score = 177 bits (450), Expect = 6e-43 Identities = 81/133 (60%), Positives = 108/133 (81%) Frame = -3 Query: 402 VVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEG 223 V ++FERMP +D+ITWT M+ A+M+FG+V+ A+ F +MP K+ +SYNALL+GFC N EG Sbjct: 359 VAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEG 418 Query: 222 LQALKLFQGMLERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAAL 43 L+AL LF M++ G EL+DFTLT ++NAC LL ++EIS+QIHGF+IKFGF SN IEAAL Sbjct: 419 LKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAAL 478 Query: 42 LDMCTRCGRMAHA 4 +DMC++CGRM A Sbjct: 479 IDMCSKCGRMDDA 491 Score = 74.3 bits (181), Expect = 9e-12 Identities = 36/123 (29%), Positives = 68/123 (55%) Frame = -3 Query: 372 KDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGM 193 +D ++ A++K G+V A + F+ M T +SY+AL+S F +A++LF M Sbjct: 135 EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRM 194 Query: 192 LERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCGRM 13 G+E ++++ +I+ AC ++E+ Q+H IK G+ ++ AL+ + +CG + Sbjct: 195 RISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCL 254 Query: 12 AHA 4 HA Sbjct: 255 DHA 257 Score = 60.5 bits (145), Expect = 1e-07 Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Frame = -3 Query: 366 VITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQALKLFQGMLE 187 V ++ + K G ++ A+ F +MP + S+N ++S +AL+LF+ + + Sbjct: 238 VFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQ 297 Query: 186 -RGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDMCTRCGRMA 10 +G + FTL++++ ACA ++IH + I+ G +N + A++ TRCG + Sbjct: 298 NKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLN 357 Query: 9 H 7 H Sbjct: 358 H 358 >ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like [Glycine max] Length = 874 Score = 174 bits (441), Expect = 7e-42 Identities = 80/135 (59%), Positives = 106/135 (78%) Frame = -3 Query: 408 DDVVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNG 229 DDV +FE M +DVITWT MV A+M+FG+V ALK F +MP K+ +SYN +L+GFC N Sbjct: 316 DDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNE 375 Query: 228 EGLQALKLFQGMLERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEA 49 +G +A++LF M+E G+EL+DF+LTS+V+AC LL ++SKQ+HGF +KFGFGSN ++EA Sbjct: 376 QGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEA 435 Query: 48 ALLDMCTRCGRMAHA 4 ALLDM TRCGRM A Sbjct: 436 ALLDMYTRCGRMVDA 450 >emb|CAB85500.1| putative protein [Arabidopsis thaliana] Length = 837 Score = 163 bits (413), Expect = 1e-38 Identities = 77/133 (57%), Positives = 104/133 (78%) Frame = -3 Query: 402 VVSIFERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEG 223 V S++E M +D +T+T M+ A+M FGMV+SA++ F + K+ I+YNAL++GFC NG G Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398 Query: 222 LQALKLFQGMLERGMELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAAL 43 L+ALKLF ML+RG+EL+DF+LTS V+AC L+S+ ++S+QIHGF IKFG NP I+ AL Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458 Query: 42 LDMCTRCGRMAHA 4 LDMCTRC RMA A Sbjct: 459 LDMCTRCERMADA 471 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/120 (27%), Positives = 69/120 (57%), Gaps = 1/120 (0%) Frame = -3 Query: 390 FERMPEKDVITWTGMVIAFMKFGMVESALKAFVQMPTKSCISYNALLSGFCHNGEGLQAL 211 F ++ E+ ++ ++K G A+ FV + + + +SY AL+SGF ++AL Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165 Query: 210 KLFQGMLERGM-ELSDFTLTSIVNACALLSQVEISKQIHGFVIKFGFGSNPWIEAALLDM 34 K+F M + G+ + +++T +I+ AC +S+ + QIHG ++K GF ++ ++ +L+ + Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225