BLASTX nr result

ID: Coptis25_contig00028991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028991
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33642.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vi...   162   2e-38
emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]   162   3e-38
ref|XP_002531475.1| mannose-6-phosphate isomerase, putative [Ric...   159   2e-37
ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37

>emb|CBI33642.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/122 (68%), Positives = 102/122 (83%)
 Frame = +2

Query: 2   GFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAVVERVKTVLRSIFTQLMSAEKDT 181
           GFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E    E+VK+VL+SIFTQLMSA K+ 
Sbjct: 99  GFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 158

Query: 182 VYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDIGVAAAFFLNYVKLNPGEALYL 361
           V ++++KLK RL ME +VRQLT+KE+LVLRLEKQYP D+GV +AFF NYVKLNPGEALYL
Sbjct: 159 VSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 218

Query: 362 GA 367
           GA
Sbjct: 219 GA 220


>ref|XP_002283926.1| PREDICTED: mannose-6-phosphate isomerase [Vitis vinifera]
          Length = 420

 Score =  162 bits (411), Expect = 2e-38
 Identities = 84/122 (68%), Positives = 102/122 (83%)
 Frame = +2

Query: 2   GFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAVVERVKTVLRSIFTQLMSAEKDT 181
           GFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E    E+VK+VL+SIFTQLMSA K+ 
Sbjct: 154 GFVSLGELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 213

Query: 182 VYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDIGVAAAFFLNYVKLNPGEALYL 361
           V ++++KLK RL ME +VRQLT+KE+LVLRLEKQYP D+GV +AFF NYVKLNPGEALYL
Sbjct: 214 VSKIITKLKIRLQMESQVRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 273

Query: 362 GA 367
           GA
Sbjct: 274 GA 275


>emb|CAN60179.1| hypothetical protein VITISV_011365 [Vitis vinifera]
          Length = 455

 Score =  162 bits (409), Expect = 3e-38
 Identities = 83/122 (68%), Positives = 102/122 (83%)
 Frame = +2

Query: 2   GFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAVVERVKTVLRSIFTQLMSAEKDT 181
           GFVSL ELK VL  VPEIVE+VG+ DA+QV+ + E    E+VK+VL+SIFTQLMSA K+ 
Sbjct: 189 GFVSLXELKIVLKDVPEIVEVVGSADANQVLDVSEEDGKEKVKSVLQSIFTQLMSANKEM 248

Query: 182 VYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDIGVAAAFFLNYVKLNPGEALYL 361
           V ++++KLK RL ME ++RQLT+KE+LVLRLEKQYP D+GV +AFF NYVKLNPGEALYL
Sbjct: 249 VSKIITKLKIRLQMESQMRQLTDKEQLVLRLEKQYPGDVGVISAFFFNYVKLNPGEALYL 308

Query: 362 GA 367
           GA
Sbjct: 309 GA 310


>ref|XP_002531475.1| mannose-6-phosphate isomerase, putative [Ricinus communis]
           gi|223528902|gb|EEF30899.1| mannose-6-phosphate
           isomerase, putative [Ricinus communis]
          Length = 374

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/117 (69%), Positives = 99/117 (84%)
 Frame = +2

Query: 17  QELKDVLCSVPEIVELVGNVDADQVIHLDEHAVVERVKTVLRSIFTQLMSAEKDTVYEVV 196
           +ELK VL ++PEIVELVG  DA QV+H++E    E+VK+V+RSIFTQLMSA K+ + EV+
Sbjct: 110 KELKAVLQNIPEIVELVGTADAKQVLHVNEQDGEEKVKSVVRSIFTQLMSASKEMITEVI 169

Query: 197 SKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDIGVAAAFFLNYVKLNPGEALYLGA 367
           SKLK RL ME +VRQLT+KE+L+L+LEKQYP DIGV +AFF NYVKLNPGEALYLGA
Sbjct: 170 SKLKIRLHMESQVRQLTDKEQLILQLEKQYPADIGVISAFFFNYVKLNPGEALYLGA 226


>ref|XP_002305820.1| predicted protein [Populus trichocarpa] gi|222848784|gb|EEE86331.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  157 bits (398), Expect = 6e-37
 Identities = 81/122 (66%), Positives = 98/122 (80%)
 Frame = +2

Query: 2   GFVSLQELKDVLCSVPEIVELVGNVDADQVIHLDEHAVVERVKTVLRSIFTQLMSAEKDT 181
           GF+S+ ELK VL  VPEIVE+VG+ +A+QV+ + E    E+VK+VLRS FTQLMSA ++ 
Sbjct: 169 GFISIGELKGVLRDVPEIVEVVGSAEANQVLQIHEQDHEEKVKSVLRSAFTQLMSASQEI 228

Query: 182 VYEVVSKLKGRLTMEKKVRQLTNKEELVLRLEKQYPNDIGVAAAFFLNYVKLNPGEALYL 361
             E +SKLK RL ME K+RQLT KE+LVL+LEKQYP DIGV +AFFLNYVKLN GEALYL
Sbjct: 229 TAEAISKLKSRLYMESKIRQLTGKEQLVLQLEKQYPADIGVISAFFLNYVKLNSGEALYL 288

Query: 362 GA 367
           GA
Sbjct: 289 GA 290


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