BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028982
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB88310.1| putative protein [Arabidopsis thaliana]                68   7e-10
ref|NP_191452.2| F-box/LRR-repeat protein [Arabidopsis thaliana]...    68   7e-10
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    67   2e-09
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    67   2e-09
ref|NP_191441.1| putative F-box protein [Arabidopsis thaliana] g...    67   2e-09

>emb|CAB88310.1| putative protein [Arabidopsis thaliana]
          Length = 455

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   LPTKYAVAASLLSRRWENLFTSISKLEISDKQ-LYSTESESENPMVKENLMNFVDRVLLL 177
           LP K+    S+LS+ W NL+  I  L+I D + L+  E ++E   ++++ ++FVDRVL L
Sbjct: 19  LPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFVDFVDRVLAL 78

Query: 178 HDASSIDRFSLTCIEIYDAARVISWISTVL 267
            D S IDRFSL CI       V  WI  VL
Sbjct: 79  QDDSPIDRFSLKCITGIHPDHVNRWICNVL 108


>ref|NP_191452.2| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75244411|sp|Q8GXW6.1|FBL59_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g58930
           gi|26451056|dbj|BAC42633.1| unknown protein [Arabidopsis
           thaliana] gi|28951059|gb|AAO63453.1| At3g58930
           [Arabidopsis thaliana] gi|332646330|gb|AEE79851.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 482

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   LPTKYAVAASLLSRRWENLFTSISKLEISDKQ-LYSTESESENPMVKENLMNFVDRVLLL 177
           LP K+    S+LS+ W NL+  I  L+I D + L+  E ++E   ++++ ++FVDRVL L
Sbjct: 19  LPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLEIRQSFVDFVDRVLAL 78

Query: 178 HDASSIDRFSLTCIEIYDAARVISWISTVL 267
            D S IDRFSL CI       V  WI  VL
Sbjct: 79  QDDSPIDRFSLKCITGIHPDHVNRWICNVL 108


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   LPTKYAVAASLLSRRWENLFTSISKLEISDKQLYSTESESENPMVKENLMNFVDRVLLLH 180
           LPTK A + S+LS++W  LF  +  L++ D    + E+E+E   +  + M+FVDRVL L 
Sbjct: 25  LPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETE---ISTSFMDFVDRVLALQ 81

Query: 181 DASSIDRFSLTCIEIYDAARVISWISTVL 267
             S + +FSL   +  D  R+I WI+ VL
Sbjct: 82  GNSPLHKFSLKIGDGIDPVRIIPWINNVL 110


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   LPTKYAVAASLLSRRWENLFTSISKLEISDKQLYSTESESENPMVKENLMNFVDRVLLLH 180
           LPTK A + S+LS++W  LF  +  L++ D    + E+E+E   +  + M+FVDRVL L 
Sbjct: 25  LPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETE---ISTSFMDFVDRVLALQ 81

Query: 181 DASSIDRFSLTCIEIYDAARVISWISTVL 267
             S + +FSL   +  D  R+I WI+ VL
Sbjct: 82  GNSPLHKFSLKIGDGIDPVRIIPWINNVL 110


>ref|NP_191441.1| putative F-box protein [Arabidopsis thaliana]
           gi|75264357|sp|Q9LXS0.1|FB206_ARATH RecName:
           Full=Putative F-box protein At3g58820
           gi|7630077|emb|CAB88299.1| putative protein [Arabidopsis
           thaliana] gi|332646315|gb|AEE79836.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 413

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   LPTKYAVAASLLSRRWENLFTSISKLEISDKQ-LYSTESESENPMVKENLMNFVDRVLLL 177
           L TK A   S+LS+RW NL   +  L I D   L+  E + + P + ++ M+FVDR+L L
Sbjct: 19  LTTKEAALTSILSKRWRNLIAFVPNLYIDDTVFLHPEEGKRDRPEIIQSFMDFVDRILAL 78

Query: 178 HDASSIDRFSLTCIEIYDAARVISWISTVLS 270
                I + SL C+   D+ RV +WIS VL+
Sbjct: 79  QGNYPIKKCSLKCLTEVDSVRVDAWISNVLA 109