BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028981
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi...   128   4e-58
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   134   3e-57
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo...   130   6e-57
emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]        125   2e-55
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   132   9e-55

>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score =  128 bits (322), Expect(2) = 4e-58
 Identities = 67/178 (37%), Positives = 99/178 (55%)
 Frame = +3

Query: 6    KIDISKTYDRIGWNFLRKALSSFGFNEH*CNMVMFCVQSVSYSIIVNGKSCGYFNLKRGI 185
            K+D+ K YD + W+FL   L   GF +     VM CV SV Y++ +NG+        RG+
Sbjct: 1348 KVDMMKAYDHVEWSFLHGCLLKLGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGL 1407

Query: 186  RQGDPLSPYLFILGMEVLSTHLLHIQQSKLIKGISIGRGAPSIHHLLYADDIVLFGNNEL 365
            RQGDP+SPYLF+L  E LS+ L   +   +I+GI  GR  P I HLL+ADD + F  ++L
Sbjct: 1408 RQGDPISPYLFLLCTEGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDL 1467

Query: 366  KEVNEMVGALKLFYQASGHQINFEKSDLLFSPHATVDFKQNSRTVFDIKTQQPISIYL 539
              V  +  AL+ + +ASG +IN +KS + F  +   D K + +    +  +     YL
Sbjct: 1468 HSVQGLKDALQAYCKASGQKINLQKSSIFFGQNCPEDIKNSVKETLQVSVEILQDTYL 1525



 Score =  124 bits (310), Expect(2) = 4e-58
 Identities = 71/196 (36%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
 Frame = +1

Query: 529  QSIYLGSPTCLSRVTSKSFNPXXXXXXXXXXXWKASTLSQAGRLTLINAVCSAISNHQMG 708
            Q  YLG PT + R ++ SF+            W    +S+AG+ T++ AV  AI  + M 
Sbjct: 1521 QDTYLGMPTEIGRASTGSFHFLPERVWRRVNSWNDRPMSRAGKETMLKAVAQAIPTYVMS 1580

Query: 709  DFKLPEVITHPIDIHRRAFLWGYEVNTKKVHSVNWETIEKPKLNGSLGVRNLQHTNLALL 888
             FKLP      +        WG+E   KK+H  +WE +  PK  G +G R+L   N A+L
Sbjct: 1581 CFKLPVSTCEKMKSCILDHWWGFEDGKKKMHWRSWEWMTTPKSLGGMGFRDLGLFNQAML 1640

Query: 889  AKTGWEVIASDRSLWIDIVKTKYLRNQDFLTVCPKPL-DSRVWRDILKARTVLTKGLGWE 1065
            A+ GW ++    SL   ++K +Y  N D L   PKP   S  WR IL  R +L KG+ W 
Sbjct: 1641 ARQGWRIVTDLVSLCARVLKGRYFPNSD-LWNAPKPTATSFTWRSILFGRDLLRKGVRWG 1699

Query: 1066 IGNGSDINLFTERWIP 1113
            IGNGS + +  + WIP
Sbjct: 1700 IGNGSSVKILKDHWIP 1715


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  134 bits (337), Expect(2) = 3e-57
 Identities = 72/177 (40%), Positives = 105/177 (59%)
 Frame = +3

Query: 15  ISKTYDRIGWNFLRKALSSFGFNEH*CNMVMFCVQSVSYSIIVNGKSCGYFNLKRGIRQG 194
           +SK YDR+ W FL+  +   GF++   +++M CV +VSY I VNG+       KRG RQG
Sbjct: 1   MSKAYDRVEWTFLQGMMRKLGFHDKWIHLIMKCVTTVSYRINVNGEYTDQIVPKRGSRQG 60

Query: 195 DPLSPYLFILGMEVLSTHLLHIQQSKLIKGISIGRGAPSIHHLLYADDIVLFGNNELKEV 374
           DPLSPYLFIL  E LS  L   + +  I+GI I RGAP ++HL +ADD ++      ++ 
Sbjct: 61  DPLSPYLFILCAEGLSAMLQSAENAGKIEGIKICRGAPRVNHLFFADDSLMLMRARKEDA 120

Query: 375 NEMVGALKLFYQASGHQINFEKSDLLFSPHATVDFKQNSRTVFDIKTQQPISIYLSG 545
           +E+   L+++ +ASG  IN +KS ++FSP+ +  FK   R    I  +     YL G
Sbjct: 121 HELKHILEIYERASGQVINKDKSSIMFSPNTSDYFKGKMRKELSIMQEARSEKYLGG 177



 Score =  115 bits (287), Expect(2) = 3e-57
 Identities = 59/192 (30%), Positives = 94/192 (48%)
 Frame = +1

Query: 538  YLGSPTCLSRVTSKSFNPXXXXXXXXXXXWKASTLSQAGRLTLINAVCSAISNHQMGDFK 717
            YLG P    +   K+F             W+   LS+AG+  LI AV  AI  + M  F 
Sbjct: 174  YLGGPISTGKSRKKAFEYIKQRIWARIQGWQEKLLSKAGKEILIKAVAQAIPTYAMSYFN 233

Query: 718  LPEVITHPIDIHRRAFLWGYEVNTKKVHSVNWETIEKPKLNGSLGVRNLQHTNLALLAKT 897
            L +     +      + W  +  T K+H ++WE +   K  G LG R+L H NLA+LA+ 
Sbjct: 234  LTKSFCDDLSSMVGRYWWSEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQ 293

Query: 898  GWEVIASDRSLWIDIVKTKYLRNQDFLTVCPKPLDSRVWRDILKARTVLTKGLGWEIGNG 1077
             W ++    +L   ++K +Y  N + L    +      WR I+    +L +G+ W IG+G
Sbjct: 294  AWRILIEPDTLCGRVLKARYFPNSNILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSG 353

Query: 1078 SDINLFTERWIP 1113
            S++N++T+ WIP
Sbjct: 354  SNVNIWTDPWIP 365


>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
          Length = 490

 Score =  130 bits (327), Expect(2) = 6e-57
 Identities = 68/178 (38%), Positives = 100/178 (56%)
 Frame = +3

Query: 6   KIDISKTYDRIGWNFLRKALSSFGFNEH*CNMVMFCVQSVSYSIIVNGKSCGYFNLKRGI 185
           K+D+ K YDR+ W+FL   L   GF +     VM CV SV Y++ +NG+        RG+
Sbjct: 61  KVDMMKAYDRVEWSFLHGCLLKLGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGL 120

Query: 186 RQGDPLSPYLFILGMEVLSTHLLHIQQSKLIKGISIGRGAPSIHHLLYADDIVLFGNNEL 365
           RQGDP+SPYLF+L  E LS+ L   +   +I+GI  GR  P I HLL+ADD + F  ++L
Sbjct: 121 RQGDPISPYLFLLCTEGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDL 180

Query: 366 KEVNEMVGALKLFYQASGHQINFEKSDLLFSPHATVDFKQNSRTVFDIKTQQPISIYL 539
             V  +  AL+ + +ASG +IN +KS + F  +   D K + +    +  +     YL
Sbjct: 181 HSVQGLKDALQAYCKASGQKINLQKSSIFFGQNCLEDIKNSVKETLQVSVEILQDTYL 238



 Score =  118 bits (295), Expect(2) = 6e-57
 Identities = 69/196 (35%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
 Frame = +1

Query: 529  QSIYLGSPTCLSRVTSKSFNPXXXXXXXXXXXWKASTLSQAGRLTLINAVCSAISNHQMG 708
            Q  YLG PT + R ++ SF+            W    +S+A + T++ AV  AI  + M 
Sbjct: 234  QDTYLGMPTEIGRASTGSFHFLPERVWRRVNGWNDRPMSRARKETMLKAVAQAIPTYVMS 293

Query: 709  DFKLPEVITHPIDIHRRAFLWGYEVNTKKVHSVNWETIEKPKLNGSLGVRNLQHTNLALL 888
             FKLP      +        WG+E   KK+H  +WE +  PK  G +G R+L   N A+L
Sbjct: 294  CFKLPVSTCEKMKSCILDHWWGFEDGKKKMHWRSWEWMTTPKSLGGMGFRDLGLFNQAML 353

Query: 889  AKTGWEVIASDRSLWIDIVKTKYLRNQDFLTVCPKPL-DSRVWRDILKARTVLTKGLGWE 1065
            A+ GW ++    SL   ++K +Y  N D L   PKP   S  W  IL  R +L KG+ W 
Sbjct: 354  ARQGWRIVTDLVSLCARVLKGRYFPNSD-LWNAPKPTATSFTWPSILFGRDLLRKGVRWG 412

Query: 1066 IGNGSDINLFTERWIP 1113
            IGNGS + +  + WIP
Sbjct: 413  IGNGSSVKILKDHWIP 428


>emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]
          Length = 427

 Score =  125 bits (313), Expect(2) = 2e-55
 Identities = 66/173 (38%), Positives = 96/173 (55%)
 Frame = +3

Query: 21  KTYDRIGWNFLRKALSSFGFNEH*CNMVMFCVQSVSYSIIVNGKSCGYFNLKRGIRQGDP 200
           K YDR+ W+FL   L   GF +     VM CV SV Y++ +NG+        RG+RQGDP
Sbjct: 3   KAYDRVEWSFLHGCLLKLGFADPWIQTVMRCVTSVRYAVRINGELTNPVTPSRGLRQGDP 62

Query: 201 LSPYLFILGMEVLSTHLLHIQQSKLIKGISIGRGAPSIHHLLYADDIVLFGNNELKEVNE 380
           +SPYLF+L  E LS+ L   +   +I+GI  GR  P I HLL+ADD + F  ++L  V  
Sbjct: 63  ISPYLFLLCTEGLSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQG 122

Query: 381 MVGALKLFYQASGHQINFEKSDLLFSPHATVDFKQNSRTVFDIKTQQPISIYL 539
           +  AL+ + +ASG +IN +KS + F  +   D K + +    +  +     YL
Sbjct: 123 LKDALQAYCKASGQKINLQKSSIFFGQNCLEDIKNSVKETLQVSVEILQDTYL 175



 Score =  118 bits (295), Expect(2) = 2e-55
 Identities = 69/196 (35%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
 Frame = +1

Query: 529  QSIYLGSPTCLSRVTSKSFNPXXXXXXXXXXXWKASTLSQAGRLTLINAVCSAISNHQMG 708
            Q  YLG PT + R ++ SF+            W    +S+A + T++ AV  AI  + M 
Sbjct: 171  QDTYLGMPTEIGRASTGSFHFLPERVWRRVNGWNDRPMSRARKETMLKAVAQAIPTYVMS 230

Query: 709  DFKLPEVITHPIDIHRRAFLWGYEVNTKKVHSVNWETIEKPKLNGSLGVRNLQHTNLALL 888
             FKLP      +        WG+E   KK+H  +WE +  PK  G +G R+L   N A+L
Sbjct: 231  CFKLPVSTCEKMKSCILDHWWGFEDGKKKMHWRSWEWMTTPKSLGGMGFRDLGLFNQAML 290

Query: 889  AKTGWEVIASDRSLWIDIVKTKYLRNQDFLTVCPKPL-DSRVWRDILKARTVLTKGLGWE 1065
            A+ GW ++    SL   ++K +Y  N D L   PKP   S  W  IL  R +L KG+ W 
Sbjct: 291  ARQGWRIVTDLVSLCARVLKGRYFPNSD-LWNAPKPTATSFTWPSILFGRDLLRKGVRWG 349

Query: 1066 IGNGSDINLFTERWIP 1113
            IGNGS + +  + WIP
Sbjct: 350  IGNGSSVKILKDHWIP 365


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  132 bits (333), Expect(2) = 9e-55
 Identities = 70/178 (39%), Positives = 101/178 (56%)
 Frame = +3

Query: 6    KIDISKTYDRIGWNFLRKALSSFGFNEH*CNMVMFCVQSVSYSIIVNGKSCGYFNLKRGI 185
            K D+SK YDR+ W+FL+K L  FGF+    + V+ CV SVSYS ++NG   G     RG+
Sbjct: 469  KTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGL 528

Query: 186  RQGDPLSPYLFILGMEVLSTHLLHIQQSKLIKGISIGRGAPSIHHLLYADDIVLFGNNEL 365
            RQGDPLSP LFIL  EVLS      Q+ + + G+ +    P ++HLL+ADD + F  ++ 
Sbjct: 529  RQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSKSDP 588

Query: 366  KEVNEMVGALKLFYQASGHQINFEKSDLLFSPHATVDFKQNSRTVFDIKTQQPISIYL 539
            +  N++   L  + +ASG  INF KS + FS       K   + +  I+ +     YL
Sbjct: 589  ESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYL 646



 Score =  108 bits (270), Expect(2) = 9e-55
 Identities = 59/191 (30%), Positives = 90/191 (47%)
 Frame = +1

Query: 538  YLGSPTCLSRVTSKSFNPXXXXXXXXXXXWKASTLSQAGRLTLINAVCSAISNHQMGDFK 717
            YLG P    R     F             W +  LSQAG+  ++ AV +++  + M  FK
Sbjct: 645  YLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFK 704

Query: 718  LPEVITHPIDIHRRAFLWGYEVNTKKVHSVNWETIEKPKLNGSLGVRNLQHTNLALLAKT 897
            LP  +   I      F W  + + +K   V W  +  PK  G LG R+++  N +LLAK 
Sbjct: 705  LPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDIERCNDSLLAKL 764

Query: 898  GWEVIASDRSLWIDIVKTKYLRNQDFLTVCPKPLDSRVWRDILKARTVLTKGLGWEIGNG 1077
            GW ++ S  SL   I+  KY  +  F+        S  WR I+  R +L +GLGW I NG
Sbjct: 765  GWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIAGREILKEGLGWLITNG 824

Query: 1078 SDINLFTERWI 1110
              ++++ + W+
Sbjct: 825  EKVSIWNDPWL 835