BLASTX nr result
ID: Coptis25_contig00028958
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028958 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK26521.1| unknown [Picea sitchensis] 125 4e-27 emb|CBI31086.3| unnamed protein product [Vitis vinifera] 123 1e-26 ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi... 123 1e-26 ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi... 122 2e-26 ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab... 122 3e-26 >gb|ABK26521.1| unknown [Picea sitchensis] Length = 370 Score = 125 bits (314), Expect = 4e-27 Identities = 61/116 (52%), Positives = 77/116 (66%) Frame = -2 Query: 349 LSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSITV 170 L+ +G KE + LFEQM +KP+++T++VVLS CSH LV G YF M D I+ Sbjct: 74 LAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISP 133 Query: 169 SQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2 EHYSCMVDL R+G L EA FI QMP++P VW + LG CR+HGNIELA+ A Sbjct: 134 KAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERA 189 >emb|CBI31086.3| unnamed protein product [Vitis vinifera] Length = 766 Score = 123 bits (309), Expect = 1e-26 Identities = 58/117 (49%), Positives = 73/117 (62%) Frame = -2 Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173 A +G++K+ L LF M I+PD VT+L ++SAC H V G YFR M E+ I Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 586 Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2 EHY+CMVDL R+G L EAFG I MP P VW T LG CR+HGN+ELA++A Sbjct: 587 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 643 >ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Vitis vinifera] Length = 853 Score = 123 bits (309), Expect = 1e-26 Identities = 58/117 (49%), Positives = 73/117 (62%) Frame = -2 Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173 A +G++K+ L LF M I+PD VT+L ++SAC H V G YFR M E+ I Sbjct: 626 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 685 Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2 EHY+CMVDL R+G L EAFG I MP P VW T LG CR+HGN+ELA++A Sbjct: 686 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 742 >ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Glycine max] Length = 846 Score = 122 bits (307), Expect = 2e-26 Identities = 58/117 (49%), Positives = 72/117 (61%) Frame = -2 Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173 A +G +E L LF +M + PD VT+LV++SAC H LVG G YF M + I Sbjct: 624 AYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIG 683 Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2 EHY+CMVDL R+G L EAF IK MP P VW T LG CR+HGN+ELA++A Sbjct: 684 ARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLA 740 >ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata] Length = 1112 Score = 122 bits (306), Expect = 3e-26 Identities = 57/113 (50%), Positives = 73/113 (64%) Frame = -2 Query: 340 NGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSITVSQE 161 +G + VL F QM +KP+EVTY+ +LSACSH LV G +F M ED I E Sbjct: 553 HGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612 Query: 160 HYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2 HY+CMVDLLCR+G L +AF FI MP + + VW T+LG CR+H N EL ++A Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665