BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028958
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26521.1| unknown [Picea sitchensis]                             125   4e-27
emb|CBI31086.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab...   122   3e-26

>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/116 (52%), Positives = 77/116 (66%)
 Frame = -2

Query: 349 LSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSITV 170
           L+ +G  KE + LFEQM    +KP+++T++VVLS CSH  LV  G  YF  M  D  I+ 
Sbjct: 74  LAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISP 133

Query: 169 SQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2
             EHYSCMVDL  R+G L EA  FI QMP++P   VW + LG CR+HGNIELA+ A
Sbjct: 134 KAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERA 189


>emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/117 (49%), Positives = 73/117 (62%)
 Frame = -2

Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173
           A   +G++K+ L LF  M    I+PD VT+L ++SAC H   V  G  YFR M E+  I 
Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 586

Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2
              EHY+CMVDL  R+G L EAFG I  MP  P   VW T LG CR+HGN+ELA++A
Sbjct: 587 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 643


>ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/117 (49%), Positives = 73/117 (62%)
 Frame = -2

Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173
           A   +G++K+ L LF  M    I+PD VT+L ++SAC H   V  G  YFR M E+  I 
Sbjct: 626 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 685

Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2
              EHY+CMVDL  R+G L EAFG I  MP  P   VW T LG CR+HGN+ELA++A
Sbjct: 686 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 742


>ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/117 (49%), Positives = 72/117 (61%)
 Frame = -2

Query: 352 ALSTNGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSIT 173
           A   +G  +E L LF +M    + PD VT+LV++SAC H  LVG G  YF  M  +  I 
Sbjct: 624 AYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIG 683

Query: 172 VSQEHYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2
              EHY+CMVDL  R+G L EAF  IK MP  P   VW T LG CR+HGN+ELA++A
Sbjct: 684 ARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLA 740


>ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein
           ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata]
          Length = 1112

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/113 (50%), Positives = 73/113 (64%)
 Frame = -2

Query: 340 NGKVKEVLALFEQMRTLNIKPDEVTYLVVLSACSHGSLVGHGCEYFRLMAEDSSITVSQE 161
           +G  + VL  F QM    +KP+EVTY+ +LSACSH  LV  G  +F  M ED  I    E
Sbjct: 553 HGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612

Query: 160 HYSCMVDLLCRSGYLLEAFGFIKQMPLKPGIRVWSTYLGFCRMHGNIELAQIA 2
           HY+CMVDLLCR+G L +AF FI  MP +  + VW T+LG CR+H N EL ++A
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665