BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028956
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]    60   2e-11
emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]    58   8e-11
emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]    58   8e-11
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]    58   1e-10
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...    55   2e-10

>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score = 60.5 bits (145), Expect(2) = 2e-11
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +3

Query: 384 PHIYGLFDQLKAARYFSKIDLRSGYQEMLVRESDIQETTFRT 509
           P I  LFDQLK A+YFSKIDLR+GY ++ VRE D+ +T FRT
Sbjct: 703 PRIDDLFDQLKGAKYFSKIDLRTGYHQLRVREEDVSKTAFRT 744



 Score = 33.1 bits (74), Expect(2) = 2e-11
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 295 WLHRMGGSLCLCIDYQWMNSVTINNKY 375
           ++ +  G+L LCIDY+ +N VT+ NKY
Sbjct: 674 FVKKKDGTLRLCIDYRKLNRVTVKNKY 700


>emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]
          Length = 893

 Score = 58.2 bits (139), Expect(2) = 8e-11
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 384 PHIYGLFDQLKAARYFSKIDLRSGYQEMLVRESDIQETTFRT 509
           P I  LFDQLK A+YFSKIDLR+GY ++ +RE ++ +T FRT
Sbjct: 64  PRIDDLFDQLKGAKYFSKIDLRTGYHQLRIREENVSKTAFRT 105



 Score = 33.1 bits (74), Expect(2) = 8e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
 Frame = +1

Query: 292 PW------LHRMGGSLCLCIDYQWMNSVTINNKY 375
           PW      + +  G+L LCIDY+ +N VT+ NKY
Sbjct: 28  PWGAPVLSVKKKDGTLRLCIDYRKLNRVTVKNKY 61


>emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]
          Length = 701

 Score = 58.2 bits (139), Expect(2) = 8e-11
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 384 PHIYGLFDQLKAARYFSKIDLRSGYQEMLVRESDIQETTFRT 509
           P I  LFDQLK A+YFSKIDLR+GY ++ +RE ++ +T FRT
Sbjct: 252 PRIDDLFDQLKGAKYFSKIDLRTGYHQLRIREENVSKTAFRT 293



 Score = 33.1 bits (74), Expect(2) = 8e-11
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
 Frame = +1

Query: 292 PW------LHRMGGSLCLCIDYQWMNSVTINNKY 375
           PW      + +  G+L LCIDY+ +N VT+ NKY
Sbjct: 216 PWGAPVLSVKKKDGTLRLCIDYRKLNRVTVKNKY 249


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 384 PHIYGLFDQLKAARYFSKIDLRSGYQEMLVRESDIQETTFRT 509
           P I  LFDQLK A+YFSKIDLR+ Y ++ VRE D+ +T FRT
Sbjct: 572 PRIDDLFDQLKGAKYFSKIDLRTXYHQLRVREEDVSKTAFRT 613



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 295 WLHRMGGSLCLCIDYQWMNSVTINNKY 375
           ++ +  G+L LCIDY+ +N VT+ NKY
Sbjct: 543 FVKKKDGTLRLCIDYRKLNRVTVKNKY 569


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 55.1 bits (131), Expect(2) = 2e-10
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = +3

Query: 384 PHIYGLFDQLKAARYFSKIDLRSGYQEMLVRESDIQETTFRT 509
           P I  LFDQL+ A  FSKIDLRSGY ++ VRE DI +T FRT
Sbjct: 735 PRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKTAFRT 776



 Score = 35.0 bits (79), Expect(2) = 2e-10
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +1

Query: 295 WLHRMGGSLCLCIDYQWMNSVTINNKY 375
           ++ +  GSL +CIDY+ +N VTI NKY
Sbjct: 706 FVRKKDGSLRICIDYRQLNKVTIKNKY 732