BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028955
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group]        117   2e-45
emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]           117   2e-45
gb|AAN16328.1| putative polyprotein [Oryza sativa Japonica Group...   117   2e-45
gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc...   115   3e-45
emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]         117   3e-45

>emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group]
          Length = 1581

 Score =  117 bits (292), Expect(2) = 2e-45
 Identities = 55/103 (53%), Positives = 74/103 (71%)
 Frame = -3

Query: 564  LCKHQLYGKFSRCDFSFSKVKFLGHLISAAGISVDPSKIGALLNWPKPRSVTEIRSFLGH 385
            L +HQLY KFS+C+F  S+VKFLGH+ISA G++VDPS +  + NW +P++V+EIRSFLG 
Sbjct: 821  LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVEFITNWKQPKTVSEIRSFLGL 880

Query: 384  TGYYRRFI*GFSRLLAPLTKLTQKGVGFGGSRNVKILFSTCPN 256
            TGYYRRFI  FS++  P+T+L QK V +  S   +  F    N
Sbjct: 881  TGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKN 923



 Score = 92.4 bits (228), Expect(2) = 2e-45
 Identities = 45/73 (61%), Positives = 57/73 (78%)
 Frame = -2

Query: 790 ESDIQETTFRTRICNYEFAVMPFGLTNAPAAFMDLMH*VFWTHLDQYVFVFIGNILIYSR 611
           E DI +T F TR   +E+ VM FGLTNAP  FM+LM+ VF  +LD++V VFI +ILIYSR
Sbjct: 746 EEDIPKTAFTTRYGLFEYTVMSFGLTNAPTIFMNLMNKVFMEYLDKFVVVFIDDILIYSR 805

Query: 610 TQEEHEQHLRVAL 572
           T+EEHE+HLR+AL
Sbjct: 806 TKEEHEEHLRLAL 818


>emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]
          Length = 1571

 Score =  117 bits (293), Expect(2) = 2e-45
 Identities = 55/103 (53%), Positives = 74/103 (71%)
 Frame = -3

Query: 564  LCKHQLYGKFSRCDFSFSKVKFLGHLISAAGISVDPSKIGALLNWPKPRSVTEIRSFLGH 385
            L KHQLY KFS+C+F  S+VKFLGH+ISA G++VDPS + ++ NW +P++V+EIRSFLG 
Sbjct: 906  LRKHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 965

Query: 384  TGYYRRFI*GFSRLLAPLTKLTQKGVGFGGSRNVKILFSTCPN 256
             GYYRRFI  FS++  P+T+L QK V +  S   +  F    N
Sbjct: 966  AGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKN 1008



 Score = 91.7 bits (226), Expect(2) = 2e-45
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = -2

Query: 790  ESDIQETTFRTRICNYEFAVMPFGLTNAPAAFMDLMH*VFWTHLDQYVFVFIGNILIYSR 611
            E DI +T F TR   +E  VM FGLTNAPA FM+LM+ VF  +LD++V VFI +ILIYSR
Sbjct: 831  EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSR 890

Query: 610  TQEEHEQHLRVAL 572
            T+EEHE+HLR+AL
Sbjct: 891  TREEHEEHLRLAL 903


>gb|AAN16328.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|31430803|gb|AAP52669.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1263

 Score =  117 bits (294), Expect(2) = 2e-45
 Identities = 55/103 (53%), Positives = 75/103 (72%)
 Frame = -3

Query: 564  LCKHQLYGKFSRCDFSFSKVKFLGHLISAAGISVDPSKIGALLNWPKPRSVTEIRSFLGH 385
            L +HQLY KFS+C+F  S+VKFLGH+ISA G++VDPS + ++ NW +P++V+EIRSFLG 
Sbjct: 953  LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1012

Query: 384  TGYYRRFI*GFSRLLAPLTKLTQKGVGFGGSRNVKILFSTCPN 256
            TGYYRRFI  FS++  P+T+L QK V +  S   +  F    N
Sbjct: 1013 TGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKN 1055



 Score = 91.3 bits (225), Expect(2) = 2e-45
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = -2

Query: 790  ESDIQETTFRTRICNYEFAVMPFGLTNAPAAFMDLMH*VFWTHLDQYVFVFIGNILIYSR 611
            E DI +T F TR   +E  VM FGLTNAPA FM+LM+ VF  +LD++V VFI +ILIYSR
Sbjct: 878  EEDIPKTAFTTRYGLFECIVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSR 937

Query: 610  TQEEHEQHLRVAL 572
            T+EEHE+HLR+AL
Sbjct: 938  TKEEHEEHLRLAL 950


>gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2174

 Score =  115 bits (287), Expect(2) = 3e-45
 Identities = 56/109 (51%), Positives = 75/109 (68%)
 Frame = -3

Query: 564  LCKHQLYGKFSRCDFSFSKVKFLGHLISAAGISVDPSKIGALLNWPKPRSVTEIRSFLGH 385
            L +HQLY KFS+C+F  S+VKFLGH+ISA G++VDPS + ++ NW +P++V+EIRSFLG 
Sbjct: 1414 LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1473

Query: 384  TGYYRRFI*GFSRLLAPLTKLTQKGVGFGGSRNVKILFSTCPNSVDHLK 238
             GYYRRFI  FS++  P+T+L QK V +  S         C  S   LK
Sbjct: 1474 AGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEE-------CEQSFQELK 1515



 Score = 93.6 bits (231), Expect(2) = 3e-45
 Identities = 47/73 (64%), Positives = 58/73 (79%)
 Frame = -2

Query: 790  ESDIQETTFRTRICNYEFAVMPFGLTNAPAAFMDLMH*VFWTHLDQYVFVFIGNILIYSR 611
            E DI +TTF TR   +E  VM FGLTNAPA FM+LM+ VF  +LD++V VFI +ILIYSR
Sbjct: 1339 EEDIPKTTFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSR 1398

Query: 610  TQEEHEQHLRVAL 572
            T+EEHE+HLR+AL
Sbjct: 1399 TKEEHEEHLRLAL 1411


>emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]
          Length = 1712

 Score =  117 bits (292), Expect(2) = 3e-45
 Identities = 55/103 (53%), Positives = 74/103 (71%)
 Frame = -3

Query: 564  LCKHQLYGKFSRCDFSFSKVKFLGHLISAAGISVDPSKIGALLNWPKPRSVTEIRSFLGH 385
            L +HQLY KFS+C+F  S+VKFLGH+ISA G++VDPS + ++ NW +P++V+EIRSFLG 
Sbjct: 952  LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGL 1011

Query: 384  TGYYRRFI*GFSRLLAPLTKLTQKGVGFGGSRNVKILFSTCPN 256
             GYYRRFI  FS++  P+T+L QK V +  S   K  F    N
Sbjct: 1012 AGYYRRFIENFSKIAKPMTQLLQKDVKYKWSEECKQSFQELKN 1054



 Score = 91.7 bits (226), Expect(2) = 3e-45
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = -2

Query: 790  ESDIQETTFRTRICNYEFAVMPFGLTNAPAAFMDLMH*VFWTHLDQYVFVFIGNILIYSR 611
            E DI +T F TR   +E  VM FGLTNAPA FM+LM+ VF  +LD++V VFI +ILIYSR
Sbjct: 877  EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSR 936

Query: 610  TQEEHEQHLRVAL 572
            T+EEHE+HLR+AL
Sbjct: 937  TKEEHEEHLRLAL 949