BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028954
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   130   8e-29
ref|XP_002285276.2| PREDICTED: transcription initiation factor T...   112   3e-23
ref|XP_004145505.1| PREDICTED: transcription initiation factor T...   112   4e-23
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...   111   7e-23
ref|XP_003603301.1| Transcription initiation factor TFIID subuni...   110   1e-22

>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/99 (65%), Positives = 76/99 (76%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 EEEDIEKYVVKYLKSKGLRQTEMTYHEE-------QSRNPXXXXXXXTDPDIARHLLSFA 120
           EEE+IEK V+ YLK KG +QTE+ + EE       Q++N        TDPDIA+H+LSF+
Sbjct: 2   EEEEIEKAVIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAKHILSFS 61

Query: 119 ESENSPARYQEGYSKLRSWTYTSLDLYKHELLRVLYPVF 3
           ESEN PARY EGYSKLRSWTY+SLDLYKHELLRVLYPVF
Sbjct: 62  ESENIPARYHEGYSKLRSWTYSSLDLYKHELLRVLYPVF 100


>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 1 [Vitis vinifera]
          Length = 667

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 7/99 (7%)
 Frame = -1

Query: 278 EEEDIEKYVVKYLKSKGLRQTEMTYHEE-------QSRNPXXXXXXXTDPDIARHLLSFA 120
           EEE+IEK V+ YLK KG +QTE+ + EE       Q++N        TDPDIA+      
Sbjct: 2   EEEEIEKAVIAYLKKKGFKQTELAFQEEHHQHQNQQTKNSSSSISSSTDPDIAK------ 55

Query: 119 ESENSPARYQEGYSKLRSWTYTSLDLYKHELLRVLYPVF 3
            SEN PARY EGYSKLRSWTY+SLDLYKHELLRVLYPVF
Sbjct: 56  -SENIPARYHEGYSKLRSWTYSSLDLYKHELLRVLYPVF 93


>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/94 (58%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -1

Query: 278 EEEDIEKYVVKYLKSKGLRQTEMTYHEE--QSRNPXXXXXXXTDPDIARHLLSFAESENS 105
           +EE I  +V  YLK KG ++TE  + EE  Q++          D D+A+HLLSF+E+EN 
Sbjct: 2   DEELIANFVSAYLKKKGFKETEQAFQEELRQNKTNSSSPSSFIDVDVAKHLLSFSEAENI 61

Query: 104 PARYQEGYSKLRSWTYTSLDLYKHELLRVLYPVF 3
           PA+Y EGYSKLRSW Y SLDLYKHELLRVLYPVF
Sbjct: 62  PAKYLEGYSKLRSWAYNSLDLYKHELLRVLYPVF 95


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 663

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/92 (56%), Positives = 64/92 (69%)
 Frame = -1

Query: 278 EEEDIEKYVVKYLKSKGLRQTEMTYHEEQSRNPXXXXXXXTDPDIARHLLSFAESENSPA 99
           E+E I  YV  +LK KG  QTE  + EE   N         +PDIA HLL+F++ E  PA
Sbjct: 2   EDEKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSVLEPDIANHLLAFSQLETGPA 61

Query: 98  RYQEGYSKLRSWTYTSLDLYKHELLRVLYPVF 3
           R+ +GYS+LR+WTY+SLDLYKHELLRVLYPVF
Sbjct: 62  RFHDGYSRLRTWTYSSLDLYKHELLRVLYPVF 93


>ref|XP_003603301.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355492349|gb|AES73552.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 715

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 EEEDIEKYVVKYLKSKGLRQTEMTYHEE-QSRNPXXXXXXXTDPDIARHLLSFAESENSP 102
           +E++I  YV  YLK KG +QTE  + EE Q            +PDIA HL +F++ EN P
Sbjct: 2   DEDEILGYVTAYLKKKGFKQTEKVFQEEFQQNKTSSSSNSILEPDIANHLHAFSQLENGP 61

Query: 101 ARYQEGYSKLRSWTYTSLDLYKHELLRVLYPVF 3
           ARY  GYS+LR+WTY+SLDLYKHELLRVLYPVF
Sbjct: 62  ARYHNGYSRLRTWTYSSLDLYKHELLRVLYPVF 94