BLASTX nr result

ID: Coptis25_contig00028944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028944
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   5e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +1

Query: 97  ISWNCRGCGGQSTIRQIKNLISKENPDIIFLSETKSKSQHMQYLSNILNYPFFFSI 264
           +SWNCRG G  S +  ++ L++ ENP I+FLSETK KS  M+ +   L +    ++
Sbjct: 5   LSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAV 60


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