BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028943
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   102   4e-20
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...    68   7e-10
ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    67   2e-09
ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    67   2e-09
ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 RLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIVNFSRFVDHYG 110
           R+FES+V+RI  S+ V+ S LPSTSK+E N  + SRFL P EKRSMSEI   SR+ D + 
Sbjct: 312 RIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLHPTEKRSMSEITACSRYAD-FS 370

Query: 109 LKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFA 2
            KNR+R+S    N  +EE+MR+LW PIARRT VEWFA
Sbjct: 371 TKNRIRESSLAQNNIKEERMRRLWLPIARRT-VEWFA 406


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 RLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIVNFSRFVDHYG 110
           RL ESK+ + E S S + S  PSTS   +   ++ + + P EKRS+SEI   SRF +   
Sbjct: 302 RLCESKLTKAEGSDSFSASCFPSTS---YKGESSLKMINPGEKRSISEITVCSRF-NGSS 357

Query: 109 LKNRLRDSPDVNIT-REEKMRKLWSPIARRTVVEWFA 2
           LKN++R+S     + RE++ R+LW PIA+RT V+WFA
Sbjct: 358 LKNKIRESASPRSSEREDRTRRLWFPIAQRT-VQWFA 393


>ref|XP_004151734.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis sativus]
           gi|449531894|ref|XP_004172920.1| PREDICTED: E3
           ubiquitin-protein ligase ATL42-like [Cucumis sativus]
          Length = 412

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
 Frame = -2

Query: 289 RLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIVNFSRFVD--- 119
           R FESK+N+I +S+S+ G   PSTS+S  N S T R   P  +RS+SEI   SRF     
Sbjct: 296 RSFESKLNKITQSNSILG--YPSTSQSSTNPSQT-RITSPDARRSVSEITGVSRFGHDDL 352

Query: 118 --HYGLKNRLRDSPDVNIT-REEKMRKLWSPIARRTVVEWFA 2
             ++  K +  +S D+    ++E+MR++W PIA+RT V+WFA
Sbjct: 353 YMNFNRKFKNGESSDLESNVKQERMREIWYPIAKRT-VQWFA 393


>ref|XP_003517066.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 426

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = -2

Query: 283 FESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIVNFSRFVDHYGLK 104
           FESKV  +    SV+   L  TS S    ++  ++  P EKRSMSEI   SRF D  G+K
Sbjct: 315 FESKVGVLNNIKSVSDKHLLFTSDSAGKSTHAPKYANPGEKRSMSEITAVSRFGD-LGMK 373

Query: 103 NRL-RDSPDV-NITREEKMRKLWSPIARRTVVEWF 5
            R+ +DS  + N  +EE+MR++W PIARRT  +WF
Sbjct: 374 MRVFKDSSSLQNNLKEERMRQIWFPIARRT-AQWF 407


>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 RLFESKVNRIERSHSVTGSSLPSTSKSEWNVSNTSRFLIPAEKRSMSEIVNFSRFVDHYG 110
           RL + +   ++RS+SV  SSL           N+S+ L P  KRS SEI  FSRF     
Sbjct: 311 RLSKPQFPTVDRSNSVPSSSL-----------NSSKMLNPVGKRSTSEITIFSRF-RQLS 358

Query: 109 LKNRLRDSPDV-NITREEKMRKLWSPIARRTVVEWFA 2
            KN++++S  + N  ++E++R LW PIARRT V+WFA
Sbjct: 359 AKNKMKESASLGNGGKDERIRMLWLPIARRT-VQWFA 394