BLASTX nr result

ID: Coptis25_contig00028938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028938
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = +1

Query: 40  LRIYTPELTDGVAVV--PQDLINEGVEEWKDTLVGYFLEKRLVFPYVKASLEKAWKLKGS 213
           L    P +TDG   V  P D+  +G E WK TLVG+F+ ++L +P V +  ++ W   G 
Sbjct: 125 LHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSYGL 184

Query: 214 ME-LTTDRDLFYFTF 255
           +E L++D   F F F
Sbjct: 185 LEVLSSDNGFFIFNF 199


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