BLASTX nr result

ID: Coptis25_contig00028936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028936
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275264.1| PREDICTED: uncharacterized protein LOC100264...   194   1e-47
emb|CAN83225.1| hypothetical protein VITISV_031369 [Vitis vinifera]   194   1e-47
ref|XP_002309311.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002323289.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_002534424.1| conserved hypothetical protein [Ricinus comm...   162   7e-38

>ref|XP_002275264.1| PREDICTED: uncharacterized protein LOC100264119 [Vitis vinifera]
          Length = 189

 Score =  194 bits (494), Expect = 1e-47
 Identities = 105/199 (52%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
 Frame = +1

Query: 4   MVGPFQLKSLHSLHVFTMKSPFYNPTHSMKIKTLVHS--FQHMWQVLRALTKVKSMFMQL 177
           MVGP  LK+ HS HVF+MKSP      SMK+KTL+H+  F H+ ++ RAL + KS+ + +
Sbjct: 1   MVGPSHLKAPHSFHVFSMKSPSSTFQQSMKLKTLIHTLIFSHLCRIARALARAKSILIDV 60

Query: 178 LDKNKDNKTYLDTIXXXXXXXXXXLFSSIIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDS 357
           L +N         +          +F SI +HYNWCSS+V+P+  PV+D   T H Y+DS
Sbjct: 61  LKENH--------LMHMKKKKQKKIFGSIRLHYNWCSSHVMPVSTPVLDGFSTSHLYYDS 112

Query: 358 TWNTIVPAEDYYQDELSSQLSGYLKWLEEK-VPENS-IDGDLYEIDRLADKFIANCHEKF 531
           TWN+I+P E   +D    QLSGYL WLEEK V +NS ++ D+ EID+LAD FIAN HEKF
Sbjct: 113 TWNSIIPPE--CEDMAERQLSGYLHWLEEKKVHDNSTVEPDMNEIDKLADMFIANSHEKF 170

Query: 532 RLEKQESYRRYQEMLARSM 588
           RLEKQESYRR+QEMLARSM
Sbjct: 171 RLEKQESYRRFQEMLARSM 189


>emb|CAN83225.1| hypothetical protein VITISV_031369 [Vitis vinifera]
          Length = 357

 Score =  194 bits (494), Expect = 1e-47
 Identities = 105/199 (52%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
 Frame = +1

Query: 4   MVGPFQLKSLHSLHVFTMKSPFYNPTHSMKIKTLVHS--FQHMWQVLRALTKVKSMFMQL 177
           MVGP  LK+ HS HVF+MKSP      SMK+KTL+H+  F H+ ++ RAL + KS+ + +
Sbjct: 1   MVGPSHLKAPHSFHVFSMKSPSSTFQQSMKLKTLIHTLIFSHLCRIARALARAKSILIDV 60

Query: 178 LDKNKDNKTYLDTIXXXXXXXXXXLFSSIIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDS 357
           L +N         +          +F SI +HYNWCSS+V+P+  PV+D   T H Y+DS
Sbjct: 61  LKENH--------LMHMKKKKQKKIFGSIRLHYNWCSSHVMPVSTPVLDGFSTSHLYYDS 112

Query: 358 TWNTIVPAEDYYQDELSSQLSGYLKWLEEK-VPENS-IDGDLYEIDRLADKFIANCHEKF 531
           TWN+I+P E   +D    QLSGYL WLEEK V +NS ++ D+ EID+LAD FIAN HEKF
Sbjct: 113 TWNSIIPPE--CEDMAERQLSGYLHWLEEKKVHDNSTVEPDMNEIDKLADMFIANSHEKF 170

Query: 532 RLEKQESYRRYQEMLARSM 588
           RLEKQESYRR+QEMLARSM
Sbjct: 171 RLEKQESYRRFQEMLARSM 189


>ref|XP_002309311.1| predicted protein [Populus trichocarpa] gi|222855287|gb|EEE92834.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  181 bits (458), Expect = 2e-43
 Identities = 97/195 (49%), Positives = 129/195 (66%), Gaps = 3/195 (1%)
 Frame = +1

Query: 13  PFQLKSLHSLHVFTMKSPFYNPTHSMKIKTLVHSF--QHMWQVLRALTKVKSMFMQLLDK 186
           P  LK+LH L VF+ KSP  +   SMKIKTL+H+    H+ +++RAL+K KS+ +++L +
Sbjct: 5   PSFLKTLHPLQVFSTKSPS-STLSSMKIKTLIHTLIISHVCRIIRALSKAKSILVEILKE 63

Query: 187 NKDNKTYLDTIXXXXXXXXXXLF-SSIIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDSTW 363
           N+       T           +F  S  +HYNWCSS+V+P+ +PV+D     H Y+DSTW
Sbjct: 64  NQPLHFIFPTKNSKRKNRSRKIFLGSFRLHYNWCSSHVLPVSEPVLDGFSASHFYYDSTW 123

Query: 364 NTIVPAEDYYQDELSSQLSGYLKWLEEKVPENSIDGDLYEIDRLADKFIANCHEKFRLEK 543
           N+I+  E Y +D   SQLSGYL WLEEKV      G   +I+RLAD FIA+CHEKF LEK
Sbjct: 124 NSIITNEQY-EDNTESQLSGYLHWLEEKVDGEESSGTEKDINRLADLFIASCHEKFILEK 182

Query: 544 QESYRRYQEMLARSM 588
           QESYRR+QEM+ARSM
Sbjct: 183 QESYRRFQEMMARSM 197


>ref|XP_002323289.1| predicted protein [Populus trichocarpa] gi|222867919|gb|EEF05050.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  174 bits (441), Expect = 2e-41
 Identities = 94/196 (47%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
 Frame = +1

Query: 13  PFQLKSLHSLHVFTMKSPFYNPTHSMKIKTLVHSF--QHMWQVLRALTKVKSMFMQLLDK 186
           P  L++LH L VF+ K P  +   SMKIKTL+H+    H+ +++RAL+K KS+ +++L +
Sbjct: 5   PSYLRNLHPLQVFSKKPPS-STLSSMKIKTLIHTLIISHVCRIVRALSKAKSVVIEILKE 63

Query: 187 NKDNKTYLD-TIXXXXXXXXXXLF-SSIIMHYNWCSSNVIPMPQPVVDEVYTRHEYFDST 360
           N+    ++  T           +F  S  +HYNWCSS+V+P+P+PV+D   + H Y+DST
Sbjct: 64  NQHLHFFISPTKNSKKKQKHQKIFLGSFRLHYNWCSSHVLPVPEPVLDGFSSSHFYYDST 123

Query: 361 WNTIVPAEDYYQDELSSQLSGYLKWLEEKVPENSIDGDLYEIDRLADKFIANCHEKFRLE 540
           WN+I+  E   +D   SQLSGYL WL+EKV +    G   +I+RLAD FIANCHEKF LE
Sbjct: 124 WNSIITNEQC-EDNTESQLSGYLHWLDEKVDDEGPKGIEKDINRLADLFIANCHEKFILE 182

Query: 541 KQESYRRYQEMLARSM 588
           KQESYRR+Q M+ARSM
Sbjct: 183 KQESYRRFQAMMARSM 198


>ref|XP_002534424.1| conserved hypothetical protein [Ricinus communis]
           gi|223525315|gb|EEF27958.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 205

 Score =  162 bits (410), Expect = 7e-38
 Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 19/186 (10%)
 Frame = +1

Query: 88  MKIKTLVHSF--QHMWQVLRALTKVKSMFMQLLDKNKD-NKTYLDTIXXXXXXXXXXLFS 258
           MKIKTL+H+    H+ +++RAL+K KS+ +Q+L +N+  N  Y               F 
Sbjct: 1   MKIKTLIHTLIMSHVCRIVRALSKAKSILVQILKENQPINFIYPTKATKRKHRERKIFFG 60

Query: 259 SIIMHYNWCSSNVIPMPQPVVDEVY-TRHEYFDSTWNTIVPAEDYYQDELSSQLSGYLKW 435
           S  +HYNWCSS+V+P+P PV+D    T H Y+DSTWN+I+   D + +  SSQLSGYL+W
Sbjct: 61  SFRLHYNWCSSHVLPVPAPVLDGFSSTPHLYYDSTWNSIITTSDEHDE--SSQLSGYLRW 118

Query: 436 LEEKVPE-----------NSIDGD----LYEIDRLADKFIANCHEKFRLEKQESYRRYQE 570
           LEEK              N+ +GD    + EIDRLAD FIA+CHEKFRLEKQESYRR+QE
Sbjct: 119 LEEKKVNQENSTTNNNNSNNSNGDQGDVVNEIDRLADMFIASCHEKFRLEKQESYRRFQE 178

Query: 571 MLARSM 588
           M+ARS+
Sbjct: 179 MMARSI 184


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