BLASTX nr result

ID: Coptis25_contig00028935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028935
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888665.1| cytokinin synthase [Arabidopsis lyrata subsp...    74   1e-11
gb|AFI49626.1| isopentenyl transferases protein [Chrysanthemum x...    70   2e-10
dbj|BAE75936.1| adenylate isopentenyltransferase [Pisum sativum]...    69   5e-10
gb|AFV15392.1| isopentenyl transferase 1 protein [Nicotiana bent...    68   7e-10
dbj|BAB59029.1| cytokinin synthase [Arabidopsis thaliana]              68   9e-10

>ref|XP_002888665.1| cytokinin synthase [Arabidopsis lyrata subsp. lyrata]
           gi|297334506|gb|EFH64924.1| cytokinin synthase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
 Frame = +1

Query: 151 RYTTHTLSPSIKSPIIKTCSFSLKWGQQKMENQSVKIHP-----QKDKIIIIMGATGTGK 315
           R+TT T SPS  S      SF+ +  + +    S+++       +KDK+++I+GATG GK
Sbjct: 15  RFTTTTTSPSFSSHSSSLLSFTKRRRKHQPLVSSIRMEQSQSQNRKDKVVVILGATGAGK 74

Query: 316 SRLSIDLATRFFPSEIINSDKIQ 384
           SRLS+DLATR FPSEIINSDKIQ
Sbjct: 75  SRLSVDLATR-FPSEIINSDKIQ 96


>gb|AFI49626.1| isopentenyl transferases protein [Chrysanthemum x morifolium]
          Length = 331

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/46 (76%), Positives = 43/46 (93%), Gaps = 1/46 (2%)
 Frame = +1

Query: 250 SVKIH-PQKDKIIIIMGATGTGKSRLSIDLATRFFPSEIINSDKIQ 384
           SV+ H PQKDK++++MGATGTGKSRLSIDLATR +P+EIINSDK+Q
Sbjct: 26  SVRRHRPQKDKVVVVMGATGTGKSRLSIDLATR-YPAEIINSDKMQ 70


>dbj|BAE75936.1| adenylate isopentenyltransferase [Pisum sativum]
           gi|84993548|dbj|BAE75938.1| adenylate
           isopentenyltransferase [Pisum sativum]
          Length = 327

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +1

Query: 178 SIKSPIIKTCSFSLKWGQQKMENQSVKIHPQ--KDKIIIIMGATGTGKSRLSIDLATRFF 351
           S+ S     C   + +    M+N +++ H Q  K+K++++MGATGTGKS+L+IDLA  F 
Sbjct: 6   SVVSGAASACKPMVSFQPPLMDNDNLRFHQQHRKEKVVVVMGATGTGKSKLAIDLANHFP 65

Query: 352 PSEIINSDKIQ 384
           P+EIINSDK+Q
Sbjct: 66  PAEIINSDKMQ 76


>gb|AFV15392.1| isopentenyl transferase 1 protein [Nicotiana benthamiana]
          Length = 336

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +1

Query: 277 KIIIIMGATGTGKSRLSIDLATRFFPSEIINSDKIQ 384
           KI++IMGATG+GKS+LSIDLATRFFPSEIINSDKIQ
Sbjct: 50  KIVVIMGATGSGKSKLSIDLATRFFPSEIINSDKIQ 85


>dbj|BAB59029.1| cytokinin synthase [Arabidopsis thaliana]
          Length = 357

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
 Frame = +1

Query: 157 TTHTLSPSIKSPIIKTCSFSLKWGQQKMENQSV---------KIHPQKDKIIIIMGATGT 309
           TT T SPS  S    + S  L + +++ ++Q +         +   +KDK+++I+GATG 
Sbjct: 18  TTTTTSPSFSSHSSSSSSL-LSFTKRRRKHQPLVSSIRMEQSRSRNRKDKVVVILGATGA 76

Query: 310 GKSRLSIDLATRFFPSEIINSDKIQ 384
           GKSRLS+DLATR FPSEIINSDKIQ
Sbjct: 77  GKSRLSVDLATR-FPSEIINSDKIQ 100


Top