BLASTX nr result

ID: Coptis25_contig00028926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028926
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512767.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|NP_001236293.1| uncharacterized protein LOC100500574 [Glycin...    72   5e-11
ref|NP_001238534.1| uncharacterized protein LOC100500210 [Glycin...    72   5e-11
ref|XP_002299162.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
gb|AFK42058.1| unknown [Lotus japonicus]                               72   6e-11

>ref|XP_002512767.1| conserved hypothetical protein [Ricinus communis]
           gi|223547778|gb|EEF49270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = +1

Query: 1   ELGNWATLLKRHRXXXXXXXXXXXXXXIYLYFAVTLGGKGTCSGMTGAEKALCRIEVAKA 180
           ELG+W+TL++RHR              IYLYFAVTLG  G+CSG+TG +KALC +E+AK+
Sbjct: 52  ELGSWSTLVQRHRFLLTALVLLAFLCTIYLYFAVTLGATGSCSGLTGKQKALCNLELAKS 111

Query: 181 SV 186
           SV
Sbjct: 112 SV 113


>ref|NP_001236293.1| uncharacterized protein LOC100500574 [Glycine max]
           gi|255630659|gb|ACU15689.1| unknown [Glycine max]
          Length = 94

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +1

Query: 1   ELGNWATLLKRHRXXXXXXXXXXXXXXIYLYFAVTLGGKGTCSGMTGAEKALCRIEVAKA 180
           ELG+W+TL +RHR              +YLYFAVTLG  GTCSG+TGA+KA C +E+ K 
Sbjct: 25  ELGSWSTLFQRHRFLLSALVLLTLLCTVYLYFAVTLGASGTCSGLTGAQKASCHMELVKD 84

Query: 181 SV 186
           SV
Sbjct: 85  SV 86


>ref|NP_001238534.1| uncharacterized protein LOC100500210 [Glycine max]
           gi|255629714|gb|ACU15206.1| unknown [Glycine max]
          Length = 94

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +1

Query: 1   ELGNWATLLKRHRXXXXXXXXXXXXXXIYLYFAVTLGGKGTCSGMTGAEKALCRIEVAKA 180
           ELG+W+TL +RHR              +YLYFAVTLG  GTCSG+TGA+KA C +E+ K 
Sbjct: 25  ELGSWSTLFQRHRFLLSALVLLTLLCTVYLYFAVTLGASGTCSGLTGAQKASCHMELVKD 84

Query: 181 SV 186
           SV
Sbjct: 85  SV 86


>ref|XP_002299162.1| predicted protein [Populus trichocarpa] gi|222846420|gb|EEE83967.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = +1

Query: 1   ELGNWATLLKRHRXXXXXXXXXXXXXXIYLYFAVTLGGKGTCSGMTGAEKALCRIEVAKA 180
           ELG+W+TLL+RHR              IYLYFAVTLG   +CSG+TG +K LCR+E+AK 
Sbjct: 25  ELGSWSTLLRRHRFLLTAFALLAFLCTIYLYFAVTLGATESCSGLTGTKKTLCRLELAKD 84

Query: 181 SV 186
           SV
Sbjct: 85  SV 86


>gb|AFK42058.1| unknown [Lotus japonicus]
          Length = 94

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/62 (50%), Positives = 42/62 (67%)
 Frame = +1

Query: 1   ELGNWATLLKRHRXXXXXXXXXXXXXXIYLYFAVTLGGKGTCSGMTGAEKALCRIEVAKA 180
           ELGNW+TL++RHR              +YLYFAVT+G  G+CSG+TGA+KA C +E+ K 
Sbjct: 25  ELGNWSTLVQRHRFLLSTLVLLTILCFVYLYFAVTIGSNGSCSGLTGAQKASCHMELVKD 84

Query: 181 SV 186
           S+
Sbjct: 85  SI 86


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