BLASTX nr result

ID: Coptis25_contig00028913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028913
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] g...    62   9e-08
gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japo...    62   9e-08
gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indi...    62   1e-07
ref|XP_004172794.1| PREDICTED: putative F-box/kelch-repeat prote...    61   3e-07
ref|XP_004152036.1| PREDICTED: putative F-box protein At1g33020-...    61   3e-07

>ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group]
           gi|255678938|dbj|BAF25230.2| Os09g0448100, partial
           [Oryza sativa Japonica Group]
          Length = 432

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
 Frame = -3

Query: 616 VDGGISREDISGFGYAPQSKKYKYVRFLHRKLNNSLTAI----VFTLGGESWRELEHVPY 449
           V G I     +GFG+ P S KYK  R  +++ + +   +    V TLG  +WR+ E  PY
Sbjct: 199 VSGNICTGTRAGFGFDPHSNKYKVARSFYQRDSETQELVCKFEVLTLGTNAWRQTEDPPY 258

Query: 448 P-PRLGPVYCNGVLYW---SAGLKAGPYFVLSFDLETEEFQKRRVFPTGTTYDRIVGVKY 281
           P   L PV+  G +YW   S+     P   L F L  E+F    +FP   +   +  V++
Sbjct: 259 PIDALTPVHVKGAIYWIVCSSLCPDPPNAFLRFCLTDEKFS---LFPCPPS--NVKSVRF 313

Query: 280 LVVLGENVSLVRDLPPDYLEVWTLMDEKNI-WVKKYHLRRTP 158
             V GE            LE+W     +N+ W ++Y ++  P
Sbjct: 314 TEVEGELCCACFFSETLALEIWNCSGGQNLEWTRRYVIQIPP 355


>gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japonica Group]
           gi|215687326|dbj|BAG91874.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215697871|dbj|BAG92064.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 380

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
 Frame = -3

Query: 616 VDGGISREDISGFGYAPQSKKYKYVRFLHRKLNNSLTAI----VFTLGGESWRELEHVPY 449
           V G I     +GFG+ P S KYK  R  +++ + +   +    V TLG  +WR+ E  PY
Sbjct: 147 VSGNICTGTRAGFGFDPHSNKYKVARSFYQRDSETQELVCKFEVLTLGTNAWRQTEDPPY 206

Query: 448 P-PRLGPVYCNGVLYW---SAGLKAGPYFVLSFDLETEEFQKRRVFPTGTTYDRIVGVKY 281
           P   L PV+  G +YW   S+     P   L F L  E+F    +FP   +   +  V++
Sbjct: 207 PIDALTPVHVKGAIYWIVCSSLCPDPPNAFLRFCLTDEKFS---LFPCPPS--NVKSVRF 261

Query: 280 LVVLGENVSLVRDLPPDYLEVWTLMDEKNI-WVKKYHLRRTP 158
             V GE            LE+W     +N+ W ++Y ++  P
Sbjct: 262 TEVEGELCCACFFSETLALEIWNCSGGQNLEWTRRYVIQIPP 303


>gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indica Group]
          Length = 459

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
 Frame = -3

Query: 616 VDGGISREDISGFGYAPQSKKYKYVRFLHRKLNNSLTAI----VFTLGGESWRELEHVPY 449
           V G I     +GFG+ P S KYK  R  +++ + +   +    V TLG  +WR+ E  PY
Sbjct: 226 VSGNICTGTRAGFGFDPHSNKYKVARSSYQRDSETQELVCKFEVLTLGTNAWRQTEDPPY 285

Query: 448 P-PRLGPVYCNGVLYW---SAGLKAGPYFVLSFDLETEEFQKRRVFPTGTTYDRIVGVKY 281
           P   L PV+  G +YW   S+     P   L F L  E+F    +FP   +   +  V++
Sbjct: 286 PIDALTPVHVKGAIYWIVCSSLCPDPPNAFLRFCLTDEKFS---LFPCPPS--NVKSVRF 340

Query: 280 LVVLGENVSLVRDLPPDYLEVWTLMDEKNI-WVKKYHLRRTP 158
             V GE            LE+W     +N+ W ++Y ++  P
Sbjct: 341 TEVEGELCCACFFSETLALEIWNCSGGQNLEWTRRYVIQIPP 382


>ref|XP_004172794.1| PREDICTED: putative F-box/kelch-repeat protein At3g22870-like
           [Cucumis sativus]
          Length = 395

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
 Frame = -3

Query: 583 GFGYAPQSKKYKYVRFLHRKL-----------NNSLTAI-VFTLGGESWRELEHVPYPPR 440
           G GY P +K+YK  R     L              +T I VF  G   WR+L  +PY   
Sbjct: 157 GLGYIPSTKEYKLFRATRSDLIMCRTQQESIRQRPITIIDVFDFGRNKWRQLHSLPYLID 216

Query: 439 LGPVYCNGVLYWSAGLKAGP--YFVLSFDLETEEFQKRRVFPTG----TTYDRIV---GV 287
            G +Y +GV+Y+   +K  P  Y + + D+ETE+ +   V   G    ++  RI+   G+
Sbjct: 217 DGGIYMDGVIYFVGKVKNKPNDYAIYALDVETEKIELSAVLKAGRGPSSSRSRILQSNGI 276

Query: 286 KYLVV-LGENVSLVRDLPPDYLEVWTLMDEKNIWVKKYHLRR 164
            Y ++ +    +         ++VW  M +KN W++++ +R+
Sbjct: 277 VYAIIYVNLPTTTTHSQVMQGVQVWR-MQKKNSWIREFEIRK 317


>ref|XP_004152036.1| PREDICTED: putative F-box protein At1g33020-like [Cucumis sativus]
          Length = 395

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
 Frame = -3

Query: 583 GFGYAPQSKKYKYVRFLHRKL-----------NNSLTAI-VFTLGGESWRELEHVPYPPR 440
           G GY P +K+YK  R     L              +T I VF  G   WR+L  +PY   
Sbjct: 157 GLGYIPSTKEYKLFRATRSDLIMCRTQQESIRQRPITIIDVFDFGRNKWRQLHSLPYLID 216

Query: 439 LGPVYCNGVLYWSAGLKAGP--YFVLSFDLETEEFQKRRVFPTG----TTYDRIV---GV 287
            G +Y +GV+Y+   +K  P  Y + + D+ETE+ +   V   G    ++  RI+   G+
Sbjct: 217 DGGIYMDGVIYFVGKVKNKPNDYAIYALDVETEKIELSAVLKAGRGPSSSRSRILQSNGI 276

Query: 286 KYLVV-LGENVSLVRDLPPDYLEVWTLMDEKNIWVKKYHLRR 164
            Y ++ +    +         ++VW  M +KN W++++ +R+
Sbjct: 277 VYAIIYVNLPTTTTHSQVMQGVQVWR-MQKKNSWIREFEIRK 317


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