BLASTX nr result

ID: Coptis25_contig00028898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028898
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254...   221   1e-55
emb|CBI27322.3| unnamed protein product [Vitis vinifera]              210   3e-52
ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
ref|XP_003614248.1| hypothetical protein MTR_5g047050 [Medicago ...   206   5e-51
emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera]   202   7e-50

>ref|XP_002263089.2| PREDICTED: uncharacterized protein LOC100254361 [Vitis vinifera]
          Length = 225

 Score =  221 bits (563), Expect = 1e-55
 Identities = 112/170 (65%), Positives = 133/170 (78%), Gaps = 3/170 (1%)
 Frame = -3

Query: 550 GEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIILLYVINS-KQGKKSSRNTSRRVY 374
           G ++GRRIMIVVDSS+EAK ALQW LSH VQSQDT+ILLYV    KQG++  +  + RVY
Sbjct: 56  GLIIGRRIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVY 115

Query: 373 EL-HSMKNTCLMKRPEVRVEIALVEGKEKAPIIVEEVNKQGASLLVLGQRKRSIMWHAVM 197
           EL +SMKN C +KRPEV +E+A+VEGKEK P IVEE  K+G +LLVLGQRKRS+ W  VM
Sbjct: 116 ELLYSMKNVCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVM 175

Query: 196 MWRRNRTGASVVEYCIENANCMTVAVREKSRT-GGYLITTRHHKGFWQLA 50
           MW  NR G  VVEYCI+NA+CM +AVR KS+  GGYLITT+ HK FW LA
Sbjct: 176 MWAVNRVGGGVVEYCIQNADCMAIAVRRKSKKGGGYLITTKRHKDFWLLA 225


>emb|CBI27322.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  210 bits (534), Expect = 3e-52
 Identities = 107/162 (66%), Positives = 126/162 (77%), Gaps = 3/162 (1%)
 Frame = -3

Query: 526 MIVVDSSLEAKCALQWVLSHGVQSQDTIILLYVINS-KQGKKSSRNTSRRVYEL-HSMKN 353
           MIVVDSS+EAK ALQW LSH VQSQDT+ILLYV    KQG++  +  + RVYEL +SMKN
Sbjct: 1   MIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVYELLYSMKN 60

Query: 352 TCLMKRPEVRVEIALVEGKEKAPIIVEEVNKQGASLLVLGQRKRSIMWHAVMMWRRNRTG 173
            C +KRPEV +E+A+VEGKEK P IVEE  K+G +LLVLGQRKRS+ W  VMMW  NR G
Sbjct: 61  VCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVMMWAVNRVG 120

Query: 172 ASVVEYCIENANCMTVAVREKSRT-GGYLITTRHHKGFWQLA 50
             VVEYCI+NA+CM +AVR KS+  GGYLITT+ HK FW LA
Sbjct: 121 GGVVEYCIQNADCMAIAVRRKSKKGGGYLITTKRHKDFWLLA 162


>ref|XP_002311405.1| predicted protein [Populus trichocarpa] gi|222851225|gb|EEE88772.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  206 bits (525), Expect = 3e-51
 Identities = 107/191 (56%), Positives = 138/191 (72%), Gaps = 7/191 (3%)
 Frame = -3

Query: 601 SNIIGDQTKQLDYGVEPGEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIILLYVI- 425
           S ++GDQ K  +   +P E++GR+IMIVVDSS+EA+ ALQW LSH VQSQD +ILL+V  
Sbjct: 47  STVVGDQEKPGNSEGKPVELIGRKIMIVVDSSIEAQGALQWSLSHTVQSQDLLILLHVTK 106

Query: 424 -NSKQGK----KSSRNTSRRVYELHSMKNTCLMKRPEVRVEIALVEGKEKAPIIVEEVNK 260
            +SKQ      +  R   R    ++S+KN C +KRPE+++EIA+VEGKEK P+IVEE  K
Sbjct: 107 ESSKQATGTKTRKERGAPRACELVNSVKNMCQLKRPEIQIEIAVVEGKEKGPLIVEEAKK 166

Query: 259 QGASLLVLGQRKRSIMWHAVMMWRRNRTGASVVEYCIENANCMTVAVREKS-RTGGYLIT 83
           Q  +LLVLGQ+KRS+ W  +MMW  NR    VVEYCI+NA+CM +AVR KS + GGYLIT
Sbjct: 167 QEVALLVLGQKKRSMTWRLIMMWASNRVTGGVVEYCIQNADCMAIAVRRKSQKHGGYLIT 226

Query: 82  TRHHKGFWQLA 50
           T+ HK FW LA
Sbjct: 227 TKRHKDFWLLA 237


>ref|XP_003614248.1| hypothetical protein MTR_5g047050 [Medicago truncatula]
           gi|355515583|gb|AES97206.1| hypothetical protein
           MTR_5g047050 [Medicago truncatula]
          Length = 236

 Score =  206 bits (523), Expect = 5e-51
 Identities = 108/184 (58%), Positives = 134/184 (72%), Gaps = 8/184 (4%)
 Frame = -3

Query: 577 KQLDYGVEPGEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIILLYVI---NSKQG- 410
           ++ D GV+ G VV R+IMIV+DSS EAK ALQW L+H VQ+QDTI+LL+V+   NSKQ  
Sbjct: 53  EKFDDGVKQGSVVSRKIMIVIDSSFEAKGALQWALTHTVQNQDTIVLLHVMKPSNSKQAT 112

Query: 409 --KKSSRNTSRRVYEL-HSMKNTCLMKRPEVRVEIALVEGKEKAPIIVEEVNKQGASLLV 239
             + SS+ T  R YEL  S KN C +K PEV++EIA+ EGKEK P IVEE  +QG +LLV
Sbjct: 113 DDEASSKETDPRAYELASSFKNICNVKMPEVQIEIAVTEGKEKGPKIVEEAKRQGVALLV 172

Query: 238 LGQRKRSIMWHAVMMWRRNRTGASVVEYCIENANCMTVAVREKS-RTGGYLITTRHHKGF 62
           LGQ+KRS  W  +MMW  NR    VVEYCI+NA+CM +AVR KS + GGY+ITT+ HK F
Sbjct: 173 LGQKKRSTTWRLLMMWAGNRVTGGVVEYCIQNAHCMAIAVRRKSKKIGGYMITTKRHKDF 232

Query: 61  WQLA 50
           W LA
Sbjct: 233 WLLA 236


>emb|CAN71710.1| hypothetical protein VITISV_013457 [Vitis vinifera]
          Length = 392

 Score =  202 bits (513), Expect = 7e-50
 Identities = 101/154 (65%), Positives = 121/154 (78%), Gaps = 2/154 (1%)
 Frame = -3

Query: 550 GEVVGRRIMIVVDSSLEAKCALQWVLSHGVQSQDTIILLYVINS-KQGKKSSRNTSRRVY 374
           G ++GRRIMIVVDSS+EAK ALQW LSH VQSQDT+ILLYV    KQG++  +  + RVY
Sbjct: 56  GLIIGRRIMIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVY 115

Query: 373 EL-HSMKNTCLMKRPEVRVEIALVEGKEKAPIIVEEVNKQGASLLVLGQRKRSIMWHAVM 197
           EL +SMKN C +KRPEV +E+A+VEGKEK P IVEE  K+G +LLVLGQRKRS+ W  VM
Sbjct: 116 ELLYSMKNVCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVM 175

Query: 196 MWRRNRTGASVVEYCIENANCMTVAVREKSRTGG 95
           MW  NR G  VVEYCI+NA+CM +AVR KS+ GG
Sbjct: 176 MWAVNRVGGGVVEYCIQNADCMAIAVRRKSKKGG 209


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