BLASTX nr result
ID: Coptis25_contig00028895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028895 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat... 99 5e-19 ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi... 97 1e-18 dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare] 97 2e-18 ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 96 2e-18 emb|CBI23204.3| unnamed protein product [Vitis vinifera] 96 2e-18 >ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330-like [Glycine max] Length = 674 Score = 98.6 bits (244), Expect = 5e-19 Identities = 43/106 (40%), Positives = 71/106 (66%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 EIHGY+ R+ + D + ++LI +Y++C V+ + C F +NRD ISW+S++ G VQNG Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVHLW 7 F + LG F ML K++P V+ +S++ ACA ++A+ GK++H + Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAY 325 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/110 (27%), Positives = 65/110 (59%), Gaps = 2/110 (1%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFT--DATNRDVISWSSMVVGYVQ 151 ++H Y R + ++ + ++L+ +Y++CG+++ A IF + +RD++SW+++++G Sbjct: 321 QLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAM 380 Query: 150 NGYFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVHLWAY 1 +G+ A+ F EML ++P VA ++L+AC+ + +G W Y Sbjct: 381 HGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEG-----WKY 425 >ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like [Glycine max] Length = 975 Score = 97.4 bits (241), Expect = 1e-18 Identities = 47/107 (43%), Positives = 69/107 (64%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 EIHG+ RN LE D + +L+S+Y +C S+ IF N+ ++ W+ M+ G+ QN Sbjct: 523 EIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNE 582 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVHLWA 4 +AL TF +MLSG I+P +AVT +L AC+ +SA+R GKEVH +A Sbjct: 583 LPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFA 629 Score = 80.9 bits (198), Expect = 1e-13 Identities = 36/104 (34%), Positives = 61/104 (58%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 EIHGY++R+ D V NA ++ Y++C S+ A +F + V SW++++ + QNG Sbjct: 422 EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNG 481 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 + K+L F M+ + P+ + S+L ACA + +R GKE+H Sbjct: 482 FPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIH 525 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +H + + SD V NALI++Y +CG V+ A +F NR+++SW+S++ +NG Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276 Query: 141 FSKALGTFGEMLSGK---IQPNPVAVTSILSACAGISAIRQGKEVHLWAY 1 F + G F +L + + P+ + +++ ACA + +R G VH A+ Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAF 326 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +HG +++ + + V N+L+ +YS+CG + A +F ++V+SW++++ GY + G Sbjct: 321 VHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGD 380 Query: 141 FSKALGTFGEM-LSGKIQPNPVAVTSILSACAGISAIRQGKEVHLWAY 1 F EM K++ N V V ++L AC+G + KE+H +A+ Sbjct: 381 FRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAF 428 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Frame = -2 Query: 309 SYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGYFSKA 130 S ++L +D ++ +I++YS CGS + +F A +D+ +++++ GY +N F A Sbjct: 119 SASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDA 178 Query: 129 LGTFGEMLSG-KIQPNPVAVTSILSACAGISAIRQGKEVHLWA 4 + F E+LS + P+ + + ACAG++ + G+ VH A Sbjct: 179 ISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALA 221 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/100 (28%), Positives = 51/100 (51%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 E+H ++ + L D VT ALI +Y++CG ++ + IF +D W+ ++ GY +G Sbjct: 624 EVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHG 683 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQG 25 + KA+ F M + +P+ +L AC + +G Sbjct: 684 HGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEG 723 >dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 783 Score = 96.7 bits (239), Expect = 2e-18 Identities = 43/104 (41%), Positives = 68/104 (65%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 +IHGY+YR ESD V NALI +Y +C + A +F NR+++SW++M+ GY+QN Sbjct: 259 QIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNS 318 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 ++A+ F ++ QP+ A TSIL++C ++AI QG++VH Sbjct: 319 LDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVH 362 Score = 78.6 bits (192), Expect = 5e-13 Identities = 35/100 (35%), Positives = 57/100 (57%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 + H + +SD ++NALI +Y++CG ++ +F +DVI W+SM+ Y Q+G Sbjct: 562 QFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHG 621 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQG 25 + +AL FG M ++PN V S+LSACA + +G Sbjct: 622 HAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEG 661 Score = 70.5 bits (171), Expect = 1e-10 Identities = 31/108 (28%), Positives = 63/108 (58%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 ++HG + + L+++ V AL+++Y++ G + A +F R+ ++W++++ GY Q G Sbjct: 158 QVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAG 217 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVHLWAY 1 AL FG M ++P+ + S SAC+G+ + G+++H +AY Sbjct: 218 QAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAY 265 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/104 (29%), Positives = 57/104 (54%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 ++H + + LESD V NALI +Y++C + A +F D IS+++M+ GY + G Sbjct: 360 QVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLG 419 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 + A+ FG+M ++P+ + S+L + S + K++H Sbjct: 420 DLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIH 463 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/104 (26%), Positives = 54/104 (51%) Frame = -2 Query: 324 EIHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNG 145 +IHG ++ D +ALI VYS+ V A +F+ NRD++ W++M+ G QN Sbjct: 461 QIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNE 520 Query: 144 YFSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 +A+ F + + PN ++++ + +++I G++ H Sbjct: 521 RGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFH 564 >ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Vitis vinifera] Length = 732 Score = 96.3 bits (238), Expect = 2e-18 Identities = 40/103 (38%), Positives = 68/103 (66%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +HGY R R++ D N+L+++Y++CG ++ + +F + RD++SW+++V G+ QNG+ Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 KAL F EM + +P+ + V S+L ACA I A+ QGK +H Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIH 472 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/103 (36%), Positives = 59/103 (57%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +HG+ R LE D + +LI +Y +CG+V A IF ++DVISW++M+ G VQN Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 A+ F ML ++ P+ + S+L+ACA + + G VH Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/99 (35%), Positives = 53/99 (53%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 IH + ++ L + AL+ +YS+CG + A F +D++SWSS++ GY +G Sbjct: 471 IHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQG 25 AL + + L IQPN V SILSAC+ + QG Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQG 569 Score = 63.5 bits (153), Expect = 2e-08 Identities = 35/92 (38%), Positives = 52/92 (56%) Frame = -2 Query: 288 SDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGYFSKALGTFGEM 109 SD + N++++VY +CG V+ A +F RDVISW+S+V GY Q G + L M Sbjct: 179 SDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRM 238 Query: 108 LSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 + I+P+ S++SA A S + GK VH Sbjct: 239 KTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270 >emb|CBI23204.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 96.3 bits (238), Expect = 2e-18 Identities = 40/103 (38%), Positives = 68/103 (66%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +HGY R R++ D N+L+++Y++CG ++ + +F + RD++SW+++V G+ QNG+ Sbjct: 370 VHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGH 429 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 KAL F EM + +P+ + V S+L ACA I A+ QGK +H Sbjct: 430 LCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIH 472 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/103 (36%), Positives = 59/103 (57%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 +HG+ R LE D + +LI +Y +CG+V A IF ++DVISW++M+ G VQN Sbjct: 269 VHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 A+ F ML ++ P+ + S+L+ACA + + G VH Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371 Score = 65.5 bits (158), Expect = 4e-09 Identities = 35/99 (35%), Positives = 53/99 (53%) Frame = -2 Query: 321 IHGYSYRNRLESDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGY 142 IH + ++ L + AL+ +YS+CG + A F +D++SWSS++ GY +G Sbjct: 471 IHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530 Query: 141 FSKALGTFGEMLSGKIQPNPVAVTSILSACAGISAIRQG 25 AL + + L IQPN V SILSAC+ + QG Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQG 569 Score = 63.5 bits (153), Expect = 2e-08 Identities = 35/92 (38%), Positives = 52/92 (56%) Frame = -2 Query: 288 SDRRVTNALISVYSRCGSVQYAACIFTDATNRDVISWSSMVVGYVQNGYFSKALGTFGEM 109 SD + N++++VY +CG V+ A +F RDVISW+S+V GY Q G + L M Sbjct: 179 SDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRM 238 Query: 108 LSGKIQPNPVAVTSILSACAGISAIRQGKEVH 13 + I+P+ S++SA A S + GK VH Sbjct: 239 KTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270