BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028883
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vit...   244   1e-62
ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-lik...   228   6e-58
ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|2...   228   6e-58
ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-lik...   221   1e-55
ref|XP_002510852.1| conserved hypothetical protein [Ricinus comm...   221   1e-55

>ref|XP_002269823.1| PREDICTED: ycf20-like protein isoform 2 [Vitis vinifera]
           gi|225469308|ref|XP_002269782.1| PREDICTED: ycf20-like
           protein isoform 1 [Vitis vinifera]
           gi|297741124|emb|CBI31855.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  244 bits (622), Expect = 1e-62
 Identities = 122/155 (78%), Positives = 134/155 (86%)
 Frame = +1

Query: 154 MAQASSFISPCICHLSLTPGTSVPRGRVGVVARKSSPRYLTIRAVQENGGPRRLVDIIRF 333
           MA + S  S C+    L  GT V  G+  ++A +SSPR+ +++AVQEN GPRRLVDIIR 
Sbjct: 1   MAHSLSLPSTCLLKFGLATGTRVSHGKCSMLASRSSPRFFSVQAVQENEGPRRLVDIIRI 60

Query: 334 VPQLSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYATR 513
           VPQLSRNYF+SPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVL+TEY TR
Sbjct: 61  VPQLSRNYFQSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLITEYVTR 120

Query: 514 FYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 618
           FYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_004143642.1| PREDICTED: uncharacterized protein ycf20-like [Cucumis sativus]
           gi|449530953|ref|XP_004172456.1| PREDICTED:
           uncharacterized protein ycf20-like [Cucumis sativus]
          Length = 156

 Score =  228 bits (582), Expect = 6e-58
 Identities = 117/156 (75%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
 Frame = +1

Query: 154 MAQASSFISPCICHLSLTPGTSVPRGRVGVV-ARKSSPRYLTIRAVQENGGPRRLVDIIR 330
           MAQ++S +   + +   TP  +    R  +V +R S PR   ++AVQ+ GGPRRLVDIIR
Sbjct: 1   MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIR 60

Query: 331 FVPQLSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYAT 510
            VP+LSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEY T
Sbjct: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120

Query: 511 RFYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 618
           RFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156


>ref|XP_002318844.1| predicted protein [Populus trichocarpa] gi|222859517|gb|EEE97064.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  228 bits (582), Expect = 6e-58
 Identities = 118/155 (76%), Positives = 127/155 (81%)
 Frame = +1

Query: 154 MAQASSFISPCICHLSLTPGTSVPRGRVGVVARKSSPRYLTIRAVQENGGPRRLVDIIRF 333
           MAQ+ S I+ C   L   P   V   + G    +SS   L IRAVQEN GPRRL+DIIR 
Sbjct: 1   MAQSVSLITTCPLKLGFAPQRRVSSVKYGTSVFRSSTGRLRIRAVQENEGPRRLIDIIRT 60

Query: 334 VPQLSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYATR 513
           +P+LSRNYFR PSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEY TR
Sbjct: 61  IPELSRNYFRRPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 514 FYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 618
           FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 155


>ref|XP_003551354.1| PREDICTED: uncharacterized protein ycf20-like [Glycine max]
          Length = 151

 Score =  221 bits (563), Expect = 1e-55
 Identities = 121/157 (77%), Positives = 129/157 (82%), Gaps = 2/157 (1%)
 Frame = +1

Query: 154 MAQASSFISPCICHLSLTPGTSVPRGRVGVVAR--KSSPRYLTIRAVQENGGPRRLVDII 327
           MA ++S I      LS  P   +P+ +V V  R    S   L IRAVQENGGPRRLVDII
Sbjct: 1   MAHSTSLI---FMGLSFGP---LPKTKVSVSGRLVSRSSAGLRIRAVQENGGPRRLVDII 54

Query: 328 RFVPQLSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYA 507
           R VP+ SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEY 
Sbjct: 55  RLVPEFSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYV 114

Query: 508 TRFYYSRPKVTFPLALLNNFKMGFTYGLFIDAFKLAS 618
           T+FYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 115 TKFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 151


>ref|XP_002510852.1| conserved hypothetical protein [Ricinus communis]
           gi|223549967|gb|EEF51454.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  221 bits (563), Expect = 1e-55
 Identities = 110/130 (84%), Positives = 121/130 (93%)
 Frame = +1

Query: 229 GRVGVVARKSSPRYLTIRAVQENGGPRRLVDIIRFVPQLSRNYFRSPSRRALFGGISLLG 408
           G+ G++  +SS   L+I+AVQ+NGGP+RLVDIIR VP+ SRNYFRSPSRRALFGGISLLG
Sbjct: 26  GKYGMLISRSSRGLLSIQAVQDNGGPQRLVDIIRRVPEFSRNYFRSPSRRALFGGISLLG 85

Query: 409 GFYVAQTISLSFGALGVNDVIAAVLCVLLTEYATRFYYSRPKVTFPLALLNNFKMGFTYG 588
           GFYVAQTISLSFGALGVNDVIAAV+CVLLTEY TRFYYSRPKVTFP+ALLNNFKMGFTYG
Sbjct: 86  GFYVAQTISLSFGALGVNDVIAAVICVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYG 145

Query: 589 LFIDAFKLAS 618
           LFIDAFKLAS
Sbjct: 146 LFIDAFKLAS 155