BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028877
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           268   3e-70
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   260   9e-68
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   255   2e-66
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]   253   1e-65
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]   252   3e-65

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  268 bits (685), Expect = 3e-70
 Identities = 125/163 (76%), Positives = 141/163 (86%)
 Frame = +1

Query: 1    HWEGVKWILRYLKGTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVS 180
            HW+ VKWILRYL+GTSK CLCFG   P+L GYTDADMAGDVDS KSTSGYL+ F+GGAVS
Sbjct: 1148 HWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVS 1207

Query: 181  WQSKLQKCVALSTTEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKN 360
            WQSKLQKCVALSTTEAE+IAATE CKEL+WMK+F  ELG  Q  + + CDSQSAIHL+KN
Sbjct: 1208 WQSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKN 1267

Query: 361  PSFHSRSKHIHVRYHWIREVLEDKHLCIEKIHTDKNGSDMMTK 489
             SFHSRSKHI VRY+WIR+VLE K L +EKIHTD+NGSDM+TK
Sbjct: 1268 ASFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTK 1310


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  260 bits (664), Expect = 9e-68
 Identities = 121/163 (74%), Positives = 139/163 (85%)
 Frame = +1

Query: 1    HWEGVKWILRYLKGTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVS 180
            HWE VKWI+RYL+GTSK  L FG  KP+L GYTD+DMAGDVD+ KSTSGYL+TF+GGAVS
Sbjct: 1118 HWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVS 1177

Query: 181  WQSKLQKCVALSTTEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKN 360
            WQS+LQKCVALSTTEAEYIAA E CKELLWMK F  ELG KQ+++VV CD+QSAIHLSKN
Sbjct: 1178 WQSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKN 1237

Query: 361  PSFHSRSKHIHVRYHWIREVLEDKHLCIEKIHTDKNGSDMMTK 489
             ++H+RSKHI VRYHW+R+ L D    IEKIHTD NGSDM+TK
Sbjct: 1238 STYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTK 1280


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  255 bits (652), Expect = 2e-66
 Identities = 116/164 (70%), Positives = 143/164 (87%)
 Frame = +1

Query: 1    HWEGVKWILRYLKGTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVS 180
            HWE VKWILRYL+GT+  CLCFGGS P+L+GYTDADMAGD+D+ KS++GYL TF+GGA+S
Sbjct: 1147 HWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1206

Query: 181  WQSKLQKCVALSTTEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKN 360
            WQSKLQKCVALSTTEAEYIAATE  KE++W+KRF  ELGL QK++VV CDSQSAI LSKN
Sbjct: 1207 WQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKN 1266

Query: 361  PSFHSRSKHIHVRYHWIREVLEDKHLCIEKIHTDKNGSDMMTKV 492
              +H+R+KHI VRYHWIRE+++D+ L + KI T++N +DM+TKV
Sbjct: 1267 SMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKV 1310


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score =  253 bits (645), Expect = 1e-65
 Identities = 117/163 (71%), Positives = 136/163 (83%)
 Frame = +1

Query: 1    HWEGVKWILRYLKGTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVS 180
            HWE VKWI+RYL+GTSK  L FGG KP+L GYTD+DMAGDVD+ +ST GYL+TF+GG VS
Sbjct: 964  HWEAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGDVDNRRSTLGYLMTFSGGTVS 1023

Query: 181  WQSKLQKCVALSTTEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKN 360
            WQS+ QKCVALSTTEAEYIAA E C ELLWMK F  ELG KQ+++VV CD+QSAIHLSKN
Sbjct: 1024 WQSRQQKCVALSTTEAEYIAAXEACNELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKN 1083

Query: 361  PSFHSRSKHIHVRYHWIREVLEDKHLCIEKIHTDKNGSDMMTK 489
             ++H+RSKHI VRYHW+R+ L D    IEKIHTD NGSDM+TK
Sbjct: 1084 STYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTK 1126


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score =  252 bits (643), Expect = 3e-65
 Identities = 118/161 (73%), Positives = 138/161 (85%)
 Frame = +1

Query: 7    EGVKWILRYLKGTSKSCLCFGGSKPLLEGYTDADMAGDVDSMKSTSGYLVTFAGGAVSWQ 186
            E VKWI+RYL+GTSK  L FGG KP+L GYTD+DMAGDVD+ +STSGYL+T +GGAVSWQ
Sbjct: 779  EAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGDVDNRRSTSGYLMTCSGGAVSWQ 838

Query: 187  SKLQKCVALSTTEAEYIAATECCKELLWMKRFFDELGLKQKQFVVLCDSQSAIHLSKNPS 366
            S+LQKCVALSTTEAEYIAA E CKELLWMK F  ELG KQ+++VV CD+QS IHLSKN +
Sbjct: 839  SRLQKCVALSTTEAEYIAAAEACKELLWMKCFMQELGFKQQRYVVYCDNQSPIHLSKNST 898

Query: 367  FHSRSKHIHVRYHWIREVLEDKHLCIEKIHTDKNGSDMMTK 489
            +H+RSKHIHVRYHW+R+ L D  L IEKIHT+ NGSDM+TK
Sbjct: 899  YHARSKHIHVRYHWMRDALNDNLLEIEKIHTNNNGSDMLTK 939