BLASTX nr result

ID: Coptis25_contig00028860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028860
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83046.1| hypothetical protein VITISV_015526 [Vitis vinifera]    75   4e-12
emb|CAN67465.1| hypothetical protein VITISV_027103 [Vitis vinifera]    75   4e-12
emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]    75   6e-12
emb|CAN77423.1| hypothetical protein VITISV_032394 [Vitis vinifera]    75   6e-12
emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]    75   7e-12

>emb|CAN83046.1| hypothetical protein VITISV_015526 [Vitis vinifera]
          Length = 549

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = +2

Query: 29  PLADDIWDSEVPKQFAQPRFERYDSKGVPADHIYHFRQQIPLWQESRYDGLRCMMFPASL 208
           P    I + E+P+ F  P+F  YD    P DHI H+RQ + L  +   D L C +FPASL
Sbjct: 5   PFCSHIINYELPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 209 KGGASDWYYRLPAGSIKSFQELE*AFIEHFI 301
           +G A  W++RLP  S+ +F++L  AF+  ++
Sbjct: 63  QGQALSWFHRLPPNSVGNFRDLSEAFVGQYL 93


>emb|CAN67465.1| hypothetical protein VITISV_027103 [Vitis vinifera]
          Length = 286

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/91 (40%), Positives = 52/91 (57%)
 Frame = +2

Query: 29  PLADDIWDSEVPKQFAQPRFERYDSKGVPADHIYHFRQQIPLWQESRYDGLRCMMFPASL 208
           P    I   E P+ F  P+F  YD    P DHI H+RQ I L  +   D L C +FPASL
Sbjct: 5   PFCSHIIHYEPPRGFLVPKFSTYDGSNDPFDHIMHYRQLITL--DIGNDALLCKVFPASL 62

Query: 209 KGGASDWYYRLPAGSIKSFQELE*AFIEHFI 301
           +G A  W++RLP  S+ +F++L  AF+  ++
Sbjct: 63  QGQALSWFHRLPPNSVDNFRDLSEAFVGQYL 93


>emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]
          Length = 395

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/95 (38%), Positives = 55/95 (57%)
 Frame = +2

Query: 29  PLADDIWDSEVPKQFAQPRFERYDSKGVPADHIYHFRQQIPLWQESRYDGLRCMMFPASL 208
           P +  I D E P++F  P+F  YD    P +HI H+RQ + L  E   D L C +FPA+L
Sbjct: 5   PFSSHIIDYEPPREFIVPKFSAYDGSSDPFNHIMHYRQLMTL--EIGNDMLLCKVFPANL 62

Query: 209 KGGASDWYYRLPAGSIKSFQELE*AFIEHFIHQKK 313
           +  A  W++RLP  S+ +F++L  AF+ H +   K
Sbjct: 63  QDQALSWFHRLPINSVDNFRDLSEAFVGHTLQNIK 97


>emb|CAN77423.1| hypothetical protein VITISV_032394 [Vitis vinifera]
          Length = 498

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = +2

Query: 29  PLADDIWDSEVPKQFAQPRFERYDSKGVPADHIYHFRQQIPLWQESRYDGLRCMMFPASL 208
           P    I + E P+ F  P+F  YD    P DHI H+RQ + L  +   D L C +FPASL
Sbjct: 5   PFCSHIINYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 209 KGGASDWYYRLPAGSIKSFQELE*AFIEHFI 301
           +G A  W++RLP  S+ +F++L  AF+  ++
Sbjct: 63  QGQALSWFHRLPPNSVNNFRDLSEAFVGQYL 93


>emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]
          Length = 549

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = +2

Query: 29  PLADDIWDSEVPKQFAQPRFERYDSKGVPADHIYHFRQQIPLWQESRYDGLRCMMFPASL 208
           P    I   E P+ F  P+F  YD    P DHI H+RQ + L  +   D L C +FPASL
Sbjct: 5   PFCSHIIHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 209 KGGASDWYYRLPAGSIKSFQELE*AFIEHFI 301
           +G A  W++RLP+ S+ +F++L  AF+  ++
Sbjct: 63  QGQAFSWFHRLPSNSVDNFRDLSEAFVGQYL 93


Top