BLASTX nr result

ID: Coptis25_contig00028859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028859
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]   172   2e-40
emb|CBI14777.3| unnamed protein product [Vitis vinifera]              156   9e-36
ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|2...   144   5e-32
ref|XP_002518589.1| conserved hypothetical protein [Ricinus comm...   132   2e-28
ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|3554824...   118   3e-24

>emb|CAN76854.1| hypothetical protein VITISV_006002 [Vitis vinifera]
          Length = 359

 Score =  172 bits (436), Expect = 2e-40
 Identities = 110/301 (36%), Positives = 145/301 (48%), Gaps = 23/301 (7%)
 Frame = +3

Query: 201  YQNQVSSNSTILIYSSTMNFFKKKRNKSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYG 380
            Y     S S +++Y  T          ++ TVSYN        S FNEPDF EYD TPYG
Sbjct: 70   YSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNK-------SGFNEPDFEEYDPTPYG 122

Query: 381  GGYDISTTYGKPLPPNDIICYPRSS------SVPNQNSQKPKVENESIPPSNDNSLTPHE 542
            GGYDI+ TYGKPLPP+D ICYPR +      S+    S K + ++ES       S     
Sbjct: 123  GGYDIAQTYGKPLPPSDEICYPRDAPQAIAPSLDPLPSGKKEEDHESASEPQIGSQPSKA 182

Query: 543  IHKEVDHVDHLPNPQNGFTPLFNDNDFSNEH--DLDIPIESNLRQELPD----------- 683
              +E +   H      G T    +  + N H  +L  P+ S+   E+             
Sbjct: 183  SEEEQEQQSH------GGTEDVLNRGYENGHGSNLGEPLGSSQSGEIEGNYYDDYYPWTG 236

Query: 684  YGYDYTSQENGYSGYESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNVKQNCYEHG 851
            Y YDY +  +     E  VP  P  Y    ++ C SIFG+WPCL K  +   +    E  
Sbjct: 237  YEYDYGNGRSDKHENEKQVPQDPWGYSPEAMDFCESIFGHWPCLYKQKRHGHQGTTNEER 296

Query: 852  YGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFNYGYEKHHVEQPTYVQEENNEQLWSQKL 1031
              N+WKGTE++ FGSSYPY   KD+     D  YGYE+H+ EQP Y Q EN E  W +K 
Sbjct: 297  NSNQWKGTEDFIFGSSYPYTHQKDEGGSHGDAIYGYERHYQEQPHYPQVENEENSWLKKF 356

Query: 1032 N 1034
            +
Sbjct: 357  S 357


>emb|CBI14777.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  156 bits (395), Expect = 9e-36
 Identities = 103/285 (36%), Positives = 137/285 (48%), Gaps = 23/285 (8%)
 Frame = +3

Query: 201 YQNQVSSNSTILIYSSTMNFFKKKRNKSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYG 380
           Y     S S +++Y  T          ++ TVSYN        S FNEPDF EYD TPYG
Sbjct: 71  YSVSTVSQSELVVYDPTPYGGGYDPFHTQFTVSYNK-------SGFNEPDFEEYDPTPYG 123

Query: 381 GGYDISTTYGKPLPPNDIICYPRSS------SVPNQNSQKPKVENESIPPSNDNSLTPHE 542
           GGYDI+ TYGKPLPP+D ICYPR +      S+    S K + ++ES       S     
Sbjct: 124 GGYDIAQTYGKPLPPSDEICYPRDAPQAIAPSLDPLPSGKKEEDHESASEPQKGSQPSKA 183

Query: 543 IHKEVDHVDHLPNPQNGFTPLFNDNDFSNEH--DLDIPIESNLRQEL-----------PD 683
             +E +   H      G T    +  + N H  +L  P+ S+   E+             
Sbjct: 184 SEEEQEQQSH------GGTEDVLNRGYENGHGSNLGEPLGSSQSGEIEGNYYDDYYPWTG 237

Query: 684 YGYDYTSQENGYSGYESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNVKQNCYEHG 851
           Y YDY +  +     E  VP  P  Y    ++ C SIFG+WPCL K  +   +    E  
Sbjct: 238 YEYDYGNGRSDKHENEKQVPQDPWGYSPEAMDFCESIFGHWPCLYKQKRYGHQGTTNEER 297

Query: 852 YGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFNYGYEKHHVEQPT 986
             N+WKGTE++ FGSSYPY  SKD+     D  YGYE+ + EQP+
Sbjct: 298 NSNQWKGTEDFIFGSSYPYTPSKDEGGSHGDAIYGYERLYQEQPS 342


>ref|XP_002316699.1| predicted protein [Populus trichocarpa] gi|222859764|gb|EEE97311.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  144 bits (363), Expect = 5e-32
 Identities = 97/273 (35%), Positives = 134/273 (49%), Gaps = 25/273 (9%)
 Frame = +3

Query: 279  KSKVTVSYNMVTPSTITSEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSS 458
            +++  VSYN+       SEFNEP + EYD TPY GGYD++ TYGKPLP +   CYPRS+ 
Sbjct: 96   QTRFIVSYNV-------SEFNEPAYEEYDPTPYDGGYDLAATYGKPLPHSAETCYPRSTP 148

Query: 459  VPNQNS-------------QKPKVENESIPPSNDNS-LTPHEIHKEVDHVD-HLPNPQNG 593
             PN +S              K +V   +  P N++  ++P  I      V   L N +  
Sbjct: 149  DPNVSSLNGFSYGSIIAPYGKDEVNEPAAKPQNESKPISPPAIEAAPVPVPLELSNGRGN 208

Query: 594  FTPLFNDNDFSNEHDLDIPIESNLRQELPDYGYDYTSQENGYSGYESLVP---LPPS--- 755
                    + S E  +D P  S      P Y     +   G  GYE  +P   +PP    
Sbjct: 209  SQEKLQKGEESEEKGVDHPDPS------PGYDTGIANGSCGEFGYEYGMPGPQIPPGYGL 262

Query: 756  DYIEPCGSIFGYWPCLLKDYQKNVKQNCYE----HGYGNEWKGTEEYFFGSSYPYNDSKD 923
            + ++ C S+FGYWPCL + Y +NV  +C E       GN+WKGT +Y FGSS PY +  D
Sbjct: 263  EAMDLCESLFGYWPCLSR-YARNV-NDCQEAADCGSRGNQWKGTADYLFGSSNPYGERDD 320

Query: 924  DSVGKVDFNYGYEKHHVEQPTYVQEENNEQLWS 1022
                  +  YGYE+H+ E+P   Q +  E  WS
Sbjct: 321  GGNSHGNAIYGYERHYQEEPLSYQVKYVEDSWS 353


>ref|XP_002518589.1| conserved hypothetical protein [Ricinus communis]
            gi|223542434|gb|EEF43976.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  132 bits (332), Expect = 2e-28
 Identities = 98/252 (38%), Positives = 130/252 (51%), Gaps = 21/252 (8%)
 Frame = +3

Query: 330  SEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSSVPNQNSQKPKVENESIP 509
            SEF++ +F E D TPYGGGYD S TYGKPLPP+D  CYPRS+S+   N   P V      
Sbjct: 106  SEFDDTNFEECDPTPYGGGYDQSLTYGKPLPPSDETCYPRSTSL---NGVSPGV------ 156

Query: 510  PSNDNSLTPHEIHKEVDHVDHLPNPQNGFTPLFNDNDF-SNEHDLDIPIESNLRQELPD- 683
                  +T   + + VD  +H   PQ G  P     +    E  LD P++    +E  + 
Sbjct: 157  ------ITTPVVTEVVD--EHAAKPQAGSKPTAAIAEAEQQELQLDKPLDLYQGEESKEK 208

Query: 684  YGYDYTS---QENGYSG-----YESLVPLPPSDY----IEPCGSIFGYWPCLLKDYQKNV 827
            YG D+ S    +NG  G     YE  V   PS Y    ++ C  +FGYWPCL + Y+K  
Sbjct: 209  YGDDHNSWSGYDNGLRGESGYEYEKQVAQIPSGYGLEAMDLCEGLFGYWPCLSR-YRKRY 267

Query: 828  KQNCYEHG--YGN-EWKGTEEYFFGSSYPYNDSKDDSVGKVDFN--YGYEKHH--VEQPT 986
              +C E     GN  WKGT +Y FGS  PY D +DD  G    N  YGY++H+   +QP 
Sbjct: 268  -SDCQEAAADCGNYRWKGTADYLFGSPDPYGDRRDDDYGGSYGNVIYGYQRHYQQQQQPL 326

Query: 987  YVQEENNEQLWS 1022
            Y Q +++   WS
Sbjct: 327  YHQVDDS---WS 335


>ref|XP_003593396.1| Pro-resilin [Medicago truncatula] gi|355482444|gb|AES63647.1|
           Pro-resilin [Medicago truncatula]
          Length = 314

 Score =  118 bits (296), Expect = 3e-24
 Identities = 78/237 (32%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
 Frame = +3

Query: 327 TSEFNEPDFPEYDTTPYGGGYDISTTYGKPLPPNDIICYPRSSSVPNQ------------ 470
           T EFNEP F EYD TPYGGGYDI +TYGKPL P+D ICYPRS S+P              
Sbjct: 99  TLEFNEPAFDEYDPTPYGGGYDIDSTYGKPLAPSDKICYPRSGSIPTPIPIPIPIPIPIP 158

Query: 471 -NSQKPKVENESIPPSNDNSLTPHEIHKEVDHVDHLPNPQNGFTPLFNDNDFSNEHDLDI 647
              ++ K++ + I P  + +   + + K                P   D+      +   
Sbjct: 159 LPVEEAKLDEKVIKPPQNETKDQNAVEK----------------PQLQDSTIKETSEAYE 202

Query: 648 PIESNLRQELPD-YGYDYTSQENGYSGYESLVPLPPSDY--------IEPCGSIFGYWPC 800
             ES   +E  D Y   ++   +G+   E +  + P  Y        ++ C S+FG WPC
Sbjct: 203 GEESEDSEEKDDGYNSGWSIDGSGFGEIEIVKEVTPPQYPSGYGLETLDICESLFGTWPC 262

Query: 801 LLKDYQKNV-------KQNCYEHGYGNEWKGTEEYFFGSSYPYNDSKDDSVGKVDFN 950
           L K  ++N          NC E    N WK T +Y FG+ YPY   +DD     DFN
Sbjct: 263 LSKMKRENYCNVGIHRGNNCEE----NMWKETADYLFGNPYPYGGRRDD-----DFN 310


Top