BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028843
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis...    83   3e-14
ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [...    81   1e-13
ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [...    81   1e-13
ref|XP_002323551.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [...    77   1e-12

>ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis vinifera]
           gi|297740256|emb|CBI30438.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 54
           RLFNR   + QILG  L+ADVMLWR++ +TVGILLVT++ W+VFE SGY           
Sbjct: 6   RLFNRQRTVHQILGGGLVADVMLWRQKNLTVGILLVTLAAWVVFELSGYTLLSLVSSVFL 65

Query: 53  XXXTILFLWAKSAQILN 3
              +ILFLWAKSA ILN
Sbjct: 66  LLVSILFLWAKSAAILN 82


>ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 54
           RLFNR   L +ILG   +AD++LWRR+ +TVGILLVT++ W+VFE+SGY           
Sbjct: 6   RLFNRQRSLHEILGGGQVADLILWRRKNLTVGILLVTLAVWVVFERSGYTLLSLVSNVLL 65

Query: 53  XXXTILFLWAKSAQILN 3
               ILFLWAKSA ILN
Sbjct: 66  LLIVILFLWAKSAAILN 82


>ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 54
           RLFNR   L +ILG   +AD++LWRR+ +TVGILLVT+  W+VFE+SGY           
Sbjct: 6   RLFNRQRGLHEILGGGQVADLILWRRKNLTVGILLVTLGVWVVFERSGYTLLSLISNVLL 65

Query: 53  XXXTILFLWAKSAQILN 3
               ILFLWAKSA ILN
Sbjct: 66  LLIVILFLWAKSADILN 82


>ref|XP_002323551.1| predicted protein [Populus trichocarpa] gi|222868181|gb|EEF05312.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
 Frame = -1

Query: 224 RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 54
           RLFNR   + +I G   +ADV+LWR+  +T+GILLVT+S+W+VFE+SGY           
Sbjct: 6   RLFNRQRTVHEIFGGGFVADVILWRQMNITIGILLVTLSSWVVFERSGYTLLSLVSSVLL 65

Query: 53  XXXTILFLWAKSAQILN 3
               ILFLWAKSA ILN
Sbjct: 66  LLAVILFLWAKSAAILN 82


>ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [Cucumis sativus]
           gi|449483434|ref|XP_004156590.1| PREDICTED:
           reticulon-like protein B12-like [Cucumis sativus]
          Length = 209

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/69 (52%), Positives = 49/69 (71%)
 Frame = -1

Query: 209 LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXXXXXTILFL 30
           L +I+G  ++ADV+LWRR+ +T+GILL+T++TWLVFE+ GY              TI+FL
Sbjct: 14  LHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFL 73

Query: 29  WAKSAQILN 3
           WAKSA ILN
Sbjct: 74  WAKSASILN 82