BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028825
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              149   3e-34
emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]   149   3e-34
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           GI+ NE++FVAIL+ C+R+LDL LG Q+HA+V+K+G+  +T+V NAL+ LY KCG +D+ 
Sbjct: 166 GIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSV 225

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRIDGFRVDQFS 1
           +QLF+EM  RD+ASWNTVIS +VKE+ YERAF  FRDM RIDGFR+D F+
Sbjct: 226 LQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFT 275



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           G + + +T   IL A  R L   +G +IHA V+K+G+     V NAL+  Y KCG I   
Sbjct: 268 GFRIDHFTLSTILVAA-RGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHV 326

Query: 150 VQLFEEMIKRDLASWNTVISGLVK 79
           V LFE+M  RD+ +W  +I+  ++
Sbjct: 327 VALFEKMRVRDVITWTEMITAYME 350


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/110 (61%), Positives = 91/110 (82%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           GI+ NE++FVAIL+ C+R+LDL LG Q+HA+V+K+G+  +T+V NAL+ LY KCG +D+ 
Sbjct: 184 GIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSV 243

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRIDGFRVDQFS 1
           +QLF+EM  RD+ASWNTVIS +VKE+ YERAF  FRDM RIDGFR+D F+
Sbjct: 244 LQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFT 293



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           G + + +T   IL A  R L   +G +IHA V+K+G+     V NAL+  Y KCG I   
Sbjct: 286 GFRIDHFTLSTILVAA-RGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHV 344

Query: 150 VQLFEEMIKRDLASWNTVISGLVK 79
           V LFE+M  RD+ +W  +I+  ++
Sbjct: 345 VALFEKMRVRDVITWTEMITAYME 368


>emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
          Length = 755

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/110 (61%), Positives = 90/110 (81%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           GI+ NE++FVAIL+ C+R+LDL LG Q+HA+V+K+G+  +T+V NAL+ LY KCG +D  
Sbjct: 168 GIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDXV 227

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRIDGFRVDQFS 1
           +QLF+EM  RD+ASWNTVIS +VKE+ YERAF  FRDM RIDGFR+D F+
Sbjct: 228 LQLFDEMXHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFT 277


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/110 (58%), Positives = 83/110 (75%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           GI+PNEYTFVAIL+AC+R +D +LG Q+H +VVKLG     ++CNAL+ LY KCG +D  
Sbjct: 191 GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLV 250

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRIDGFRVDQFS 1
           ++LFEEM +RD+ SWNTVIS LVKE +Y+ AF +FR M    G +VD FS
Sbjct: 251 LRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFS 300



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/94 (32%), Positives = 53/94 (56%)
 Frame = -3

Query: 318 NEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTSVQLF 139
           +E    +ILS C  +    +G+Q+H   +K G    T V NA V +Y KC  +D +V++F
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592

Query: 138 EEMIKRDLASWNTVISGLVKELEYERAFGFFRDM 37
             M  +D+ SWN +++G V   + ++A G ++ M
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/98 (29%), Positives = 50/98 (51%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           G+K + ++   +L+AC   +    G Q+HAL +K+G      V ++L+  Y KCG  +  
Sbjct: 293 GLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDM 37
             LFE M  RD+ +W  +I+  ++    + A   F  M
Sbjct: 353 TDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKM 390


>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/110 (58%), Positives = 83/110 (75%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           GI+PNEYTFVAIL+AC+R +D +LG Q+H +VVKLG     ++CNAL+ LY KCG +D  
Sbjct: 191 GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLV 250

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDMLRIDGFRVDQFS 1
           ++LFEEM +RD+ SWNTVIS LVKE +Y+ AF +FR M    G +VD FS
Sbjct: 251 LRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFS 300



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = -3

Query: 318 NEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTSVQLF 139
           +E    +ILS C  +    +G Q+H   +K G    T V NA V +Y KC  +D +V++F
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592

Query: 138 EEMIKRDLASWNTVISGLVKELEYERAFGFFRDM 37
             M  +D+ SWN +++G V   + ++A G ++ M
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/98 (29%), Positives = 50/98 (51%)
 Frame = -3

Query: 330 GIKPNEYTFVAILSACVRVLDLRLGLQIHALVVKLGYCCFTYVCNALVDLYVKCGRIDTS 151
           G+K + ++   +L+AC   +    G Q+HAL +K+G      V ++L+  Y KCG  +  
Sbjct: 293 GLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDV 352

Query: 150 VQLFEEMIKRDLASWNTVISGLVKELEYERAFGFFRDM 37
             LFE M  RD+ +W  +I+  ++    + A   F  M
Sbjct: 353 TDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKM 390