BLASTX nr result

ID: Coptis25_contig00028797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028797
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34137.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002264621.1| PREDICTED: zinc transporter 5 isoform 1 [Vit...   161   6e-38
emb|CAN74488.1| hypothetical protein VITISV_029272 [Vitis vinifera]   161   6e-38
gb|AFK48496.1| unknown [Lotus japonicus]                              160   1e-37
ref|XP_002275820.2| PREDICTED: zinc transporter 1-like [Vitis vi...   159   2e-37

>emb|CBI34137.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/113 (72%), Positives = 93/113 (82%)
 Frame = +3

Query: 108 LIRHRVIAQVLELGIVVHSRIIGISLGASESSSTMKPLLIALCFHQFFEGMGLGGCISEA 287
           LIRHRVI+QVLELGIVVHS IIGISLGASES  T+KPL+ AL FHQFFEGMGLGGCI +A
Sbjct: 6   LIRHRVISQVLELGIVVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCIVQA 65

Query: 288 KFKVRSIAVMAAFFALTTPXXXXXXXXXTNVYKENSQTALVVEGVLNAASAGI 446
           KFK+R+ A+MA FF+LTTP         +NVY ENS TAL+VEG+ NAASAGI
Sbjct: 66  KFKLRAAAIMALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAASAGI 118


>ref|XP_002264621.1| PREDICTED: zinc transporter 5 isoform 1 [Vitis vinifera]
          Length = 351

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/113 (72%), Positives = 93/113 (82%)
 Frame = +3

Query: 108 LIRHRVIAQVLELGIVVHSRIIGISLGASESSSTMKPLLIALCFHQFFEGMGLGGCISEA 287
           LIRHRVI+QVLELGIVVHS IIGISLGASES  T+KPL+ AL FHQFFEGMGLGGCI +A
Sbjct: 192 LIRHRVISQVLELGIVVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCIVQA 251

Query: 288 KFKVRSIAVMAAFFALTTPXXXXXXXXXTNVYKENSQTALVVEGVLNAASAGI 446
           KFK+R+ A+MA FF+LTTP         +NVY ENS TAL+VEG+ NAASAGI
Sbjct: 252 KFKLRAAAIMALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAASAGI 304


>emb|CAN74488.1| hypothetical protein VITISV_029272 [Vitis vinifera]
          Length = 351

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/113 (72%), Positives = 93/113 (82%)
 Frame = +3

Query: 108 LIRHRVIAQVLELGIVVHSRIIGISLGASESSSTMKPLLIALCFHQFFEGMGLGGCISEA 287
           LIRHRVI+QVLELGIVVHS IIGISLGASES  T+KPL+ AL FHQFFEGMGLGGCI +A
Sbjct: 192 LIRHRVISQVLELGIVVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCIVQA 251

Query: 288 KFKVRSIAVMAAFFALTTPXXXXXXXXXTNVYKENSQTALVVEGVLNAASAGI 446
           KFK+R+ A+MA FF+LTTP         +NVY ENS TAL+VEG+ NAASAGI
Sbjct: 252 KFKLRAAAIMALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAASAGI 304


>gb|AFK48496.1| unknown [Lotus japonicus]
          Length = 338

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/113 (69%), Positives = 93/113 (82%)
 Frame = +3

Query: 108 LIRHRVIAQVLELGIVVHSRIIGISLGASESSSTMKPLLIALCFHQFFEGMGLGGCISEA 287
           L+RHR I+QVLELGIVVHS IIGISLGASES  T++PL+ AL FHQFFEGMGLGGCIS+A
Sbjct: 179 LLRHRAISQVLELGIVVHSVIIGISLGASESPETIRPLIAALTFHQFFEGMGLGGCISQA 238

Query: 288 KFKVRSIAVMAAFFALTTPXXXXXXXXXTNVYKENSQTALVVEGVLNAASAGI 446
           KF+ +++ VMA FF+LTTP         TN Y ENSQTAL+VEG++NAASAGI
Sbjct: 239 KFETKAVIVMALFFSLTTPVGIAIGMGITNAYDENSQTALIVEGIMNAASAGI 291


>ref|XP_002275820.2| PREDICTED: zinc transporter 1-like [Vitis vinifera]
          Length = 345

 Score =  159 bits (402), Expect = 2e-37
 Identities = 83/123 (67%), Positives = 94/123 (76%)
 Frame = +3

Query: 78  FIVVSLNLGNLIRHRVIAQVLELGIVVHSRIIGISLGASESSSTMKPLLIALCFHQFFEG 257
           F+   L    L RHRVIAQVLELGIVVHS IIGISLGASES  T+KPL+ AL FHQFFEG
Sbjct: 176 FVSGELGSPELARHRVIAQVLELGIVVHSVIIGISLGASESPKTIKPLVAALSFHQFFEG 235

Query: 258 MGLGGCISEAKFKVRSIAVMAAFFALTTPXXXXXXXXXTNVYKENSQTALVVEGVLNAAS 437
           MGLGGCIS+AKFK +++AVM  FF+LTTP         +N+Y ENS  ALVVEGV N+AS
Sbjct: 236 MGLGGCISQAKFKSKAVAVMVVFFSLTTPVGIAVGMGISNIYDENSPKALVVEGVFNSAS 295

Query: 438 AGI 446
           AGI
Sbjct: 296 AGI 298


Top