BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028788
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   152   8e-35
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              152   8e-35
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   124   2e-26
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   119   7e-25
ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata s...   110   3e-22

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  152 bits (384), Expect = 8e-35
 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
 Frame = +1

Query: 16   ENINDHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQS 195
            ++  ++ +  +SV  N+LWIG PP WVDKF+VSN L+LN+LAEMYYR           Q 
Sbjct: 1027 KHTENNSKSVDSVLGNNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQC 1086

Query: 196  TISAPTF-WEASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFL 372
            T+S      +AS+D  D+ ISS+C LL+QYI +KI+SD+EEIY+CFRLL+R ++KS+ FL
Sbjct: 1087 TLSKFLLPLDASSDGWDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFL 1146

Query: 373  QVYEEVLPYVQVSFAENYGGNLNA*HAKD 459
            + Y  V PY+Q S  ENYGG+L   HAK+
Sbjct: 1147 EAYNVVFPYLQASAGENYGGSLQLSHAKE 1175


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  152 bits (384), Expect = 8e-35
 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
 Frame = +1

Query: 16   ENINDHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQS 195
            ++  ++ +  +SV  N+LWIG PP WVDKF+VSN L+LN+LAEMYYR           Q 
Sbjct: 975  KHTENNSKSVDSVLGNNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQC 1034

Query: 196  TISAPTF-WEASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFL 372
            T+S      +AS+D  D+ ISS+C LL+QYI +KI+SD+EEIY+CFRLL+R ++KS+ FL
Sbjct: 1035 TLSKFLLPLDASSDGWDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFL 1094

Query: 373  QVYEEVLPYVQVSFAENYGGNLNA*HAKD 459
            + Y  V PY+Q S  ENYGG+L   HAK+
Sbjct: 1095 EAYNVVFPYLQASAGENYGGSLQLSHAKE 1123


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  124 bits (312), Expect = 2e-26
 Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
 Frame = +1

Query: 49   SVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQSTISAPTFWEAS 228
            SV  N LWIG PP WVDKF+VSN LILN LAEMY +           QSTIS        
Sbjct: 975  SVLNNDLWIGNPPRWVDKFKVSNCLILNSLAEMYDKLGSADNLSSVLQSTISESINHPIE 1034

Query: 229  NDP--EDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYV 402
            ND   +D+     C LL+QYI+LKI+ D+EEIY+CFRLLRR +  S+FFLQVY  V+PY+
Sbjct: 1035 NDDSWDDEAAYCFCELLKQYINLKIEFDIEEIYVCFRLLRRFTKISKFFLQVYNIVIPYL 1094

Query: 403  QVSFAENYGGNLN 441
            Q+ F   +   +N
Sbjct: 1095 QLIFFLKFQTGMN 1107


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  119 bits (298), Expect = 7e-25
 Identities = 59/126 (46%), Positives = 80/126 (63%)
 Frame = +1

Query: 61   NHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQSTISAPTFWEASNDPE 240
            ++LW G PP WV KF+VS+ L+L  LAEMYY+              IS       +    
Sbjct: 988  DNLWAGNPPNWVGKFKVSSCLMLKKLAEMYYKSGLTSTLSLVLHQIISEFYELNLAQQFS 1047

Query: 241  DDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYVQVSFAE 420
            D+ ++ +C LL+QYI +KI+ D+EEIYICFRLL+R + KS+FFLQVY  V PY+Q +  +
Sbjct: 1048 DETVNIMCELLRQYIKVKIERDIEEIYICFRLLKRFAAKSQFFLQVYNSVCPYLQATVDD 1107

Query: 421  NYGGNL 438
            NYGG L
Sbjct: 1108 NYGGTL 1113


>ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata]
            gi|297311162|gb|EFH41586.1| polymerase ATREV1-1105
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1105

 Score =  110 bits (276), Expect = 3e-22
 Identities = 58/132 (43%), Positives = 85/132 (64%), Gaps = 3/132 (2%)
 Frame = +1

Query: 55   SRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXX-QSTISAPTFWE--A 225
            S + LW G PPLW +KF+VS +  L  L+ +Y++            Q  IS  + +   A
Sbjct: 972  SCSSLWFGNPPLWTEKFKVSGNCTLEKLSGIYFKVAQLRPMLSRVLQHAISEISSFHDAA 1031

Query: 226  SNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYVQ 405
            S +  D  I  VC LL+QYI LK++ D+EEIY+CFRLL+RL+ +S+ FLQVYE + P++Q
Sbjct: 1032 SANDLDKAIYDVCELLKQYIKLKVEGDIEEIYLCFRLLKRLAARSQLFLQVYEILSPFIQ 1091

Query: 406  VSFAENYGGNLN 441
             S +E+YGG+L+
Sbjct: 1092 ASISEHYGGSLS 1103