BLASTX nr result
ID: Coptis25_contig00028788
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028788 (764 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit... 152 8e-35 emb|CBI22513.3| unnamed protein product [Vitis vinifera] 152 8e-35 ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta... 124 2e-26 ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly... 119 7e-25 ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata s... 110 3e-22 >ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera] Length = 1175 Score = 152 bits (384), Expect = 8e-35 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 1/149 (0%) Frame = +1 Query: 16 ENINDHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQS 195 ++ ++ + +SV N+LWIG PP WVDKF+VSN L+LN+LAEMYYR Q Sbjct: 1027 KHTENNSKSVDSVLGNNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQC 1086 Query: 196 TISAPTF-WEASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFL 372 T+S +AS+D D+ ISS+C LL+QYI +KI+SD+EEIY+CFRLL+R ++KS+ FL Sbjct: 1087 TLSKFLLPLDASSDGWDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFL 1146 Query: 373 QVYEEVLPYVQVSFAENYGGNLNA*HAKD 459 + Y V PY+Q S ENYGG+L HAK+ Sbjct: 1147 EAYNVVFPYLQASAGENYGGSLQLSHAKE 1175 >emb|CBI22513.3| unnamed protein product [Vitis vinifera] Length = 1123 Score = 152 bits (384), Expect = 8e-35 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 1/149 (0%) Frame = +1 Query: 16 ENINDHLEEANSVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQS 195 ++ ++ + +SV N+LWIG PP WVDKF+VSN L+LN+LAEMYYR Q Sbjct: 975 KHTENNSKSVDSVLGNNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQC 1034 Query: 196 TISAPTF-WEASNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFL 372 T+S +AS+D D+ ISS+C LL+QYI +KI+SD+EEIY+CFRLL+R ++KS+ FL Sbjct: 1035 TLSKFLLPLDASSDGWDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFL 1094 Query: 373 QVYEEVLPYVQVSFAENYGGNLNA*HAKD 459 + Y V PY+Q S ENYGG+L HAK+ Sbjct: 1095 EAYNVVFPYLQASAGENYGGSLQLSHAKE 1123 >ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis] gi|223542041|gb|EEF43585.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis] Length = 1200 Score = 124 bits (312), Expect = 2e-26 Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 2/133 (1%) Frame = +1 Query: 49 SVSRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQSTISAPTFWEAS 228 SV N LWIG PP WVDKF+VSN LILN LAEMY + QSTIS Sbjct: 975 SVLNNDLWIGNPPRWVDKFKVSNCLILNSLAEMYDKLGSADNLSSVLQSTISESINHPIE 1034 Query: 229 NDP--EDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYV 402 ND +D+ C LL+QYI+LKI+ D+EEIY+CFRLLRR + S+FFLQVY V+PY+ Sbjct: 1035 NDDSWDDEAAYCFCELLKQYINLKIEFDIEEIYVCFRLLRRFTKISKFFLQVYNIVIPYL 1094 Query: 403 QVSFAENYGGNLN 441 Q+ F + +N Sbjct: 1095 QLIFFLKFQTGMN 1107 >ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max] Length = 1115 Score = 119 bits (298), Expect = 7e-25 Identities = 59/126 (46%), Positives = 80/126 (63%) Frame = +1 Query: 61 NHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXXQSTISAPTFWEASNDPE 240 ++LW G PP WV KF+VS+ L+L LAEMYY+ IS + Sbjct: 988 DNLWAGNPPNWVGKFKVSSCLMLKKLAEMYYKSGLTSTLSLVLHQIISEFYELNLAQQFS 1047 Query: 241 DDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYVQVSFAE 420 D+ ++ +C LL+QYI +KI+ D+EEIYICFRLL+R + KS+FFLQVY V PY+Q + + Sbjct: 1048 DETVNIMCELLRQYIKVKIERDIEEIYICFRLLKRFAAKSQFFLQVYNSVCPYLQATVDD 1107 Query: 421 NYGGNL 438 NYGG L Sbjct: 1108 NYGGTL 1113 >ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata] gi|297311162|gb|EFH41586.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata] Length = 1105 Score = 110 bits (276), Expect = 3e-22 Identities = 58/132 (43%), Positives = 85/132 (64%), Gaps = 3/132 (2%) Frame = +1 Query: 55 SRNHLWIGCPPLWVDKFEVSNHLILNLLAEMYYRXXXXXXXXXXX-QSTISAPTFWE--A 225 S + LW G PPLW +KF+VS + L L+ +Y++ Q IS + + A Sbjct: 972 SCSSLWFGNPPLWTEKFKVSGNCTLEKLSGIYFKVAQLRPMLSRVLQHAISEISSFHDAA 1031 Query: 226 SNDPEDDVISSVCSLLQQYIDLKIKSDMEEIYICFRLLRRLSIKSRFFLQVYEEVLPYVQ 405 S + D I VC LL+QYI LK++ D+EEIY+CFRLL+RL+ +S+ FLQVYE + P++Q Sbjct: 1032 SANDLDKAIYDVCELLKQYIKLKVEGDIEEIYLCFRLLKRLAARSQLFLQVYEILSPFIQ 1091 Query: 406 VSFAENYGGNLN 441 S +E+YGG+L+ Sbjct: 1092 ASISEHYGGSLS 1103