BLASTX nr result

ID: Coptis25_contig00028781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028781
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24699.3| unnamed protein product [Vitis vinifera]              220   4e-55
ref|XP_002274786.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   220   4e-55
ref|XP_002517736.1| conserved hypothetical protein [Ricinus comm...   176   5e-42
ref|XP_002330696.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
ref|XP_004172747.1| PREDICTED: ion channel CASTOR-like, partial ...   149   6e-34

>emb|CBI24699.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  220 bits (560), Expect = 4e-55
 Identities = 125/266 (46%), Positives = 168/266 (63%), Gaps = 12/266 (4%)
 Frame = -1

Query: 763 MALDPESSSPSTSRDWFYPSPSILNSSRTFKHPKSFSPITRTPTPSFPNSRSFKPPSTYQ 584
           M++D ES SPS SRDWF+PSPS       F HP         P     N R  +PP    
Sbjct: 1   MSIDSESPSPSPSRDWFFPSPS-------FIHPNP----NPNPRRCVTNPRISRPPKP-- 47

Query: 583 QAFSPSNSIPHSEVKYAPLRRRIDSSKFREK-----VSKKVSIQKTE----KTDVSIENT 431
              S   S  HS  KYA +RRR++ ++  E      V++ +S QK +    K DVS++  
Sbjct: 48  ---SSFQSFSHSSSKYAGIRRRVEFARRTESLPASNVARPLSAQKPDVPVKKPDVSVD-V 103

Query: 430 SGKKRFNDLIGDQLKNRWNFAVYVVIIVTTFSSLLYKNFSLHNQVDDLKDQISKLSVRLQ 251
           SG+K+F      +   RW  A+   I+ T  +SLL+KNFSLHNQ++ L+DQI +L++RLQ
Sbjct: 104 SGEKKFAWACAGRFGGRWRMAILAAILATVLASLLHKNFSLHNQINVLQDQIYELNMRLQ 163

Query: 250 ACNVLDFVDHSNSI---SDHFPNKSLKVFALLVSLTSLFIPFPMFMYIDHVSKSLRSSQN 80
            CN+LD+VD +N +   SDH PN++LK  AL+++ T LFIPF +F Y+D+VSKS RS+ N
Sbjct: 164 TCNILDYVDLTNPVPQESDHLPNRNLKNMALIITFTLLFIPFLIFKYVDYVSKSRRSADN 223

Query: 79  VLEEVSLKKQLAYRVDAFLSVHPYAK 2
           + EEVSL KQLAY+VDAFLSVHPYAK
Sbjct: 224 ISEEVSLNKQLAYQVDAFLSVHPYAK 249


>ref|XP_002274786.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 878

 Score =  220 bits (560), Expect = 4e-55
 Identities = 125/266 (46%), Positives = 168/266 (63%), Gaps = 12/266 (4%)
 Frame = -1

Query: 763 MALDPESSSPSTSRDWFYPSPSILNSSRTFKHPKSFSPITRTPTPSFPNSRSFKPPSTYQ 584
           M++D ES SPS SRDWF+PSPS       F HP         P     N R  +PP    
Sbjct: 1   MSIDSESPSPSPSRDWFFPSPS-------FIHPNP----NPNPRRCVTNPRISRPPKP-- 47

Query: 583 QAFSPSNSIPHSEVKYAPLRRRIDSSKFREK-----VSKKVSIQKTE----KTDVSIENT 431
              S   S  HS  KYA +RRR++ ++  E      V++ +S QK +    K DVS++  
Sbjct: 48  ---SSFQSFSHSSSKYAGIRRRVEFARRTESLPASNVARPLSAQKPDVPVKKPDVSVD-V 103

Query: 430 SGKKRFNDLIGDQLKNRWNFAVYVVIIVTTFSSLLYKNFSLHNQVDDLKDQISKLSVRLQ 251
           SG+K+F      +   RW  A+   I+ T  +SLL+KNFSLHNQ++ L+DQI +L++RLQ
Sbjct: 104 SGEKKFAWACAGRFGGRWRMAILAAILATVLASLLHKNFSLHNQINVLQDQIYELNMRLQ 163

Query: 250 ACNVLDFVDHSNSI---SDHFPNKSLKVFALLVSLTSLFIPFPMFMYIDHVSKSLRSSQN 80
            CN+LD+VD +N +   SDH PN++LK  AL+++ T LFIPF +F Y+D+VSKS RS+ N
Sbjct: 164 TCNILDYVDLTNPVPQESDHLPNRNLKNMALIITFTLLFIPFLIFKYVDYVSKSRRSADN 223

Query: 79  VLEEVSLKKQLAYRVDAFLSVHPYAK 2
           + EEVSL KQLAY+VDAFLSVHPYAK
Sbjct: 224 ISEEVSLNKQLAYQVDAFLSVHPYAK 249


>ref|XP_002517736.1| conserved hypothetical protein [Ricinus communis]
           gi|223543134|gb|EEF44668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 887

 Score =  176 bits (447), Expect = 5e-42
 Identities = 112/265 (42%), Positives = 155/265 (58%), Gaps = 11/265 (4%)
 Frame = -1

Query: 763 MALDPESSS-PSTSRDWFYPSPSILNSSR------TFKHPKSFSPITRTPTPSFPNSRSF 605
           M+LD +S   PS+SRDWF+PSPS++N         T KH + FS I+ +   S  +S   
Sbjct: 1   MSLDQDSPPLPSSSRDWFFPSPSLINQPHHHIPPSTSKHYRRFSRISHST--SHRDSNPL 58

Query: 604 KPPSTYQQAFSPSNSIPHSE-VKYAPLRRRIDSSKFREKVSKKVSIQKTEKTDVSIENTS 428
           K PS      S SNS P+++  KYA  RR     +  +K     S Q ++    S + TS
Sbjct: 59  KTPSFPSPISSSSNSTPYTDPTKYARPRRPFAFPRRPDK-----SRQHSDYETPSGDKTS 113

Query: 427 GKKRFNDLIGDQLKNRWNFAVYVVIIVTTFSSLLYKNFSLHNQVDDLKDQISKLSVRLQA 248
             +R       Q++ RW+ A+   II+T  +SL++KNFSLHN+V DL+D I+ L+ +L+ 
Sbjct: 114 SGERLAGFPAHQVRVRWHIAMSAAIIITAVASLVHKNFSLHNEVIDLQDNIANLNYKLRT 173

Query: 247 CNVL---DFVDHSNSISDHFPNKSLKVFALLVSLTSLFIPFPMFMYIDHVSKSLRSSQNV 77
           CN++   D +D S+  S   P+K LK  AL+ S+T L IP  +  YID VS   RSS N+
Sbjct: 174 CNLISNVDSIDFSSLDSSDQPSKGLKHLALVSSITLLSIPVLIIKYIDFVSSKSRSSDNI 233

Query: 76  LEEVSLKKQLAYRVDAFLSVHPYAK 2
            EEVSL K + YRVD FLSVHPYAK
Sbjct: 234 SEEVSLNKLIEYRVDVFLSVHPYAK 258


>ref|XP_002330696.1| predicted protein [Populus trichocarpa] gi|222872300|gb|EEF09431.1|
           predicted protein [Populus trichocarpa]
          Length = 884

 Score =  174 bits (440), Expect = 3e-41
 Identities = 121/267 (45%), Positives = 157/267 (58%), Gaps = 13/267 (4%)
 Frame = -1

Query: 763 MALDPESS-SPSTSRDWFYPSPSILNSSRTFKHPKSFSPITRTPTPSFPNSRSFKPPSTY 587
           M+LD E S SPS  RDWF+PSPS ++ S   K PKS    + TP  S P+S   K     
Sbjct: 1   MSLDSEDSPSPSFDRDWFFPSPSFIHESPP-KSPKSHRRFSTTPKHS-PDSILSK----- 53

Query: 586 QQAFSPSNSIPHSEV-KYAPLRRRIDSSKFREKVSKKVSIQKTEKTDVSIENTSGKKRFN 410
            Q+F PS+SIP     KY  LRRR++  +   K SK+   Q     D      S KK+  
Sbjct: 54  SQSFRPSSSIPPPTTSKYGILRRRVEFPRPLIKPSKQE--QHHSFLDRKPVVPSEKKQST 111

Query: 409 DLIGD-----QLKNRWNFAVYVVIIVTTFSSLLYKNFSLHNQVDDLKDQISKLSVRLQAC 245
           + +       +++ RW+  + V I++T  +S ++KNF+LHNQV DL+DQI KL+V L+AC
Sbjct: 112 EKVSSGPSVHRVRFRWDLTITVAIVITALASSVHKNFTLHNQVIDLQDQILKLNVTLRAC 171

Query: 244 NVLDFVDHSNSIS------DHFPNKSLKVFALLVSLTSLFIPFPMFMYIDHVSKSLRSSQ 83
           N L  VD S+S+       D+  +  LK+ AL+VSLT L IP   F YID VS S RSS 
Sbjct: 172 NSLSNVDASDSVMQEIDDYDYGGDNGLKILALIVSLTLLSIPVLAFKYIDFVSTS-RSSG 230

Query: 82  NVLEEVSLKKQLAYRVDAFLSVHPYAK 2
           N+ E V L KQLAYRVD FLSV PYAK
Sbjct: 231 NIWEAVLLNKQLAYRVDVFLSVRPYAK 257


>ref|XP_004172747.1| PREDICTED: ion channel CASTOR-like, partial [Cucumis sativus]
          Length = 372

 Score =  149 bits (377), Expect = 6e-34
 Identities = 103/269 (38%), Positives = 153/269 (56%), Gaps = 15/269 (5%)
 Frame = -1

Query: 763 MALDPESSSPSTSRDWFYPSPSILNS--SRTFKHPKSFSPITRTPTPSFPNSRSFKPPST 590
           M+LD ESS PS+SRDWF+P  S ++S  +++  + + FS  +R         R  K  S+
Sbjct: 1   MSLDSESS-PSSSRDWFFPPQSFVHSHPAKSPNYIRRFSDTSRLSRRYTDYHRYRKTSSS 59

Query: 589 YQQAFSPSNSIPHSEVKYAPLRRRIDSSKFREKVSKKVSIQ-----KTEKTDVS--IENT 431
                S S+S   ++VK+A  RRR D  +  +   K   ++     K E  DVS  ++  
Sbjct: 60  ISD--SHSSSTITNDVKFARTRRRFDFDRRSDLSLKSSEVEFSSKRKLELPDVSSSVKKV 117

Query: 430 SGKKRFNDLIGDQLKNRWNF-AVYVVIIVTTFSSLLYKNFSLHNQVDDLKDQISKLSVRL 254
           S   R +  I   LK RW F A+   I V +F++++++N  L  QV++L+ +IS L+ +L
Sbjct: 118 SDTSRLSKSIDSSLKVRWIFLAITASIFVVSFATIVHENLYLQEQVNNLETRISNLNSKL 177

Query: 253 QACNVLDF-----VDHSNSISDHFPNKSLKVFALLVSLTSLFIPFPMFMYIDHVSKSLRS 89
           + CN+ D      V   + ++D F +K LK  A + SLT LF P  +  YID+VSKS RS
Sbjct: 178 RVCNLFDDGNEDDVRSPDEVTDVFTDKKLKTLASIASLTLLFAPIIILKYIDYVSKS-RS 236

Query: 88  SQNVLEEVSLKKQLAYRVDAFLSVHPYAK 2
             + LEEVSL K+LAY+VD F S+HPYAK
Sbjct: 237 LDHNLEEVSLNKRLAYKVDVFFSIHPYAK 265


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