BLASTX nr result
ID: Coptis25_contig00028768
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00028768 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [G... 75 4e-12 ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ... 74 1e-11 ref|XP_002889812.1| UPF0202 protein At1g10490 [Arabidopsis lyrat... 74 1e-11 ref|NP_001190121.1| uncharacterized protein [Arabidopsis thalian... 74 2e-11 >ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|222853514|gb|EEE91061.1| predicted protein [Populus trichocarpa] Length = 1033 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/43 (86%), Positives = 40/43 (93%) Frame = -3 Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2 DVHERF+TESHSE TG FNERF+LSLASCK+CVVMDDEL NIL Sbjct: 164 DVHERFRTESHSEATGRFNERFLLSLASCKACVVMDDEL-NIL 205 >ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [Glycine max] Length = 1029 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/53 (71%), Positives = 44/53 (83%) Frame = -3 Query: 160 SLSR*GYVYQDVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2 SL+R + DVH+RF+TESHSE G FNERF+LSLASCK+CVVMDDEL NIL Sbjct: 155 SLTRLYTMVMDVHDRFRTESHSEAAGRFNERFLLSLASCKACVVMDDEL-NIL 206 >ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera] gi|296082521|emb|CBI21526.3| unnamed protein product [Vitis vinifera] Length = 1032 Score = 74.3 bits (181), Expect = 1e-11 Identities = 35/43 (81%), Positives = 39/43 (90%) Frame = -3 Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2 DVHERF+TESHSE G FNERF+LSLASCK+CV+MDDEL NIL Sbjct: 165 DVHERFRTESHSEAAGRFNERFLLSLASCKACVIMDDEL-NIL 206 >ref|XP_002889812.1| UPF0202 protein At1g10490 [Arabidopsis lyrata subsp. lyrata] gi|297335654|gb|EFH66071.1| UPF0202 protein At1g10490 [Arabidopsis lyrata subsp. lyrata] Length = 1055 Score = 73.9 bits (180), Expect = 1e-11 Identities = 35/43 (81%), Positives = 40/43 (93%) Frame = -3 Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2 DVH+RF+TESHSE +G FNERF+LSLASCK+CVVMDDEL NIL Sbjct: 165 DVHDRFRTESHSEASGRFNERFLLSLASCKACVVMDDEL-NIL 206 >ref|NP_001190121.1| uncharacterized protein [Arabidopsis thaliana] gi|332646200|gb|AEE79721.1| uncharacterized protein [Arabidopsis thaliana] Length = 1023 Score = 73.6 bits (179), Expect = 2e-11 Identities = 35/43 (81%), Positives = 39/43 (90%) Frame = -3 Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2 DVH+RF+TESHSE G FNERF+LSLASCK+CVVMDDEL NIL Sbjct: 165 DVHDRFRTESHSEAAGRFNERFLLSLASCKACVVMDDEL-NIL 206