BLASTX nr result

ID: Coptis25_contig00028768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028768
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [G...    75   4e-12
ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ...    74   1e-11
ref|XP_002889812.1| UPF0202 protein At1g10490 [Arabidopsis lyrat...    74   1e-11
ref|NP_001190121.1| uncharacterized protein [Arabidopsis thalian...    74   2e-11

>ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|222853514|gb|EEE91061.1|
           predicted protein [Populus trichocarpa]
          Length = 1033

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2
           DVHERF+TESHSE TG FNERF+LSLASCK+CVVMDDEL NIL
Sbjct: 164 DVHERFRTESHSEATGRFNERFLLSLASCKACVVMDDEL-NIL 205


>ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [Glycine max]
          Length = 1029

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -3

Query: 160 SLSR*GYVYQDVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2
           SL+R   +  DVH+RF+TESHSE  G FNERF+LSLASCK+CVVMDDEL NIL
Sbjct: 155 SLTRLYTMVMDVHDRFRTESHSEAAGRFNERFLLSLASCKACVVMDDEL-NIL 206


>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
           gi|296082521|emb|CBI21526.3| unnamed protein product
           [Vitis vinifera]
          Length = 1032

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2
           DVHERF+TESHSE  G FNERF+LSLASCK+CV+MDDEL NIL
Sbjct: 165 DVHERFRTESHSEAAGRFNERFLLSLASCKACVIMDDEL-NIL 206


>ref|XP_002889812.1| UPF0202 protein At1g10490 [Arabidopsis lyrata subsp. lyrata]
           gi|297335654|gb|EFH66071.1| UPF0202 protein At1g10490
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2
           DVH+RF+TESHSE +G FNERF+LSLASCK+CVVMDDEL NIL
Sbjct: 165 DVHDRFRTESHSEASGRFNERFLLSLASCKACVVMDDEL-NIL 206


>ref|NP_001190121.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332646200|gb|AEE79721.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1023

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 130 DVHERFQTESHSEVTGHFNERFILSLASCKSCVVMDDELINIL 2
           DVH+RF+TESHSE  G FNERF+LSLASCK+CVVMDDEL NIL
Sbjct: 165 DVHDRFRTESHSEAAGRFNERFLLSLASCKACVVMDDEL-NIL 206


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