BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028756
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...    42   8e-08
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    42   8e-08
ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...    41   1e-07
ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...    41   1e-07
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...    41   2e-07

>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score = 41.6 bits (96), Expect(2) = 8e-08
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 329 YVQWTTTIRDQVHANHKSLIVCTGRFGLNTSRLTANDVLPIEELNDQSRGFLVNDTCIFE 508
           Y Q++ T+ +Q+H  +        +F    S       +P+ EL D  RG+LVND+CI E
Sbjct: 115 YAQFSLTVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDSCIVE 174

Query: 509 ISV 517
             V
Sbjct: 175 ADV 177



 Score = 40.4 bits (93), Expect(2) = 8e-08
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 139 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLVYPKGEGI 279
           + +P S   TW I  +S+ N   +  +    G YKW +LV+PKG  +
Sbjct: 47  VDDPPSARFTWTIDNFSRFNTKKLYSDVFVVGGYKWRILVFPKGNNV 93


>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
           vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
           product [Vitis vinifera]
          Length = 1115

 Score = 41.6 bits (96), Expect(2) = 8e-08
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +1

Query: 139 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLVYPKGEGI 279
           +++P S   TW I  +S++N   +  +    G YKW +L++PKG  +
Sbjct: 46  VEDPPSARFTWTIENFSRLNTKKLYSDVFYVGGYKWRVLIFPKGNNV 92



 Score = 40.4 bits (93), Expect(2) = 8e-08
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +2

Query: 329 YVQWTTTIRDQVHANHKSLIVCTGRFGLNTSRLTANDVLPIEELNDQSRGFLVNDTCIFE 508
           Y Q++  + +Q+H           +F    S       +P+ EL D +RG+LVNDTCI E
Sbjct: 114 YAQFSLAVINQIHNKFTIRKDTQHQFNARESDWGFTSFMPLGELYDPARGYLVNDTCIVE 173

Query: 509 ISV 517
             V
Sbjct: 174 ADV 176


>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
           predicted protein [Populus trichocarpa]
          Length = 1239

 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 139 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLVYPKGEGI 279
           +++P SM  TW I  ++++N      +    G+YKW +L++PKG  +
Sbjct: 46  VEDPPSMKFTWTIENFTRLNTKKHYSDVFIVGSYKWRVLIFPKGNNV 92



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 329 YVQWTTTIRDQVHANHKSLIVCTGRFGLNTSRLTANDVLPIEELNDQSRGFLVNDTCIFE 508
           Y Q++  + +Q+H  +        +F    S       +P+ EL D SRG+LVNDT + E
Sbjct: 114 YAQFSLAVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIE 173

Query: 509 ISV 517
             V
Sbjct: 174 AEV 176


>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 139 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLVYPKGEGI 279
           +++P SM  TW I  ++++N      +    G+YKW +L++PKG  +
Sbjct: 47  VEDPPSMKFTWTIENFTRLNTKKHYSDIFIVGSYKWRVLIFPKGNNV 93



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 329 YVQWTTTIRDQVHANHKSLIVCTGRFGLNTSRLTANDVLPIEELNDQSRGFLVNDTCIFE 508
           Y Q++  + +Q+H  +        +F    S       +P+ EL D SRG+LVNDT + E
Sbjct: 115 YAQFSLAVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIE 174

Query: 509 ISV 517
             V
Sbjct: 175 AEV 177


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1109

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +2

Query: 329 YVQWTTTIRDQVHANHKSLIVCTGRFGLNTSRLTANDVLPIEELNDQSRGFLVNDTCIFE 508
           Y Q++  + +Q+H  +        +F    S       +P+ EL D  RG+LVNDTC+ E
Sbjct: 115 YAQFSLCVVNQIHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVE 174

Query: 509 ISV 517
             V
Sbjct: 175 ADV 177



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 145 EPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLVYPKGEGI 279
           +P S   TW I  +S++N   +  +    G YKW +L++PKG  +
Sbjct: 49  DPPSARFTWTIDNFSRLNTKKLYSDVFIVGGYKWRILIFPKGNNV 93