BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028748
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsu...    83   3e-14
ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...    78   7e-13
emb|CBI25851.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...    75   5e-12

>gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463014|gb|ACP39959.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 288

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/76 (51%), Positives = 58/76 (76%)
 Frame = +2

Query: 11  GFEYYDEMEKIDCLPSIDSNIYSILLVGLCQHGYSVEAVRLINAMVKRKIKVKASYTDSL 190
           GF  Y+E+E++  + SID++IYSILLVGLC+  +SVEAV+L   M++R+I+++A Y D +
Sbjct: 208 GFCLYNEIERMQYISSIDTDIYSILLVGLCRQSHSVEAVKLARLMLRRRIRLEAPYVDEI 267

Query: 191 IKSLQNSGEKELALHL 238
           IK L+NS +KEL   L
Sbjct: 268 IKHLKNSTDKELVTQL 283


>ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|222833786|gb|EEE72263.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/78 (48%), Positives = 55/78 (70%)
 Frame = +2

Query: 11  GFEYYDEMEKIDCLPSIDSNIYSILLVGLCQHGYSVEAVRLINAMVKRKIKVKASYTDSL 190
           GF  Y+E+EK  CL SID +IYSILL GLCQ G+S EA RL  +M++++I ++A + + +
Sbjct: 396 GFCLYEEVEKTGCLSSIDIDIYSILLAGLCQQGHSAEAARLARSMLEKRIPLRAPHVEKI 455

Query: 191 IKSLQNSGEKELALHLKS 244
           ++ L+N G KEL   L S
Sbjct: 456 VEHLKNFGGKELVAELVS 473


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/76 (50%), Positives = 55/76 (72%)
 Frame = +2

Query: 11  GFEYYDEMEKIDCLPSIDSNIYSILLVGLCQHGYSVEAVRLINAMVKRKIKVKASYTDSL 190
           GF  +DE E ++ L  +DS+IYSILLVGL Q  +SVEAV+L   MV R I++K  Y DS+
Sbjct: 391 GFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYFDSI 450

Query: 191 IKSLQNSGEKELALHL 238
           ++ L+ SG+KE+ ++L
Sbjct: 451 VEHLKESGDKEIVMYL 466


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/82 (46%), Positives = 56/82 (68%)
 Frame = +2

Query: 11  GFEYYDEMEKIDCLPSIDSNIYSILLVGLCQHGYSVEAVRLINAMVKRKIKVKASYTDSL 190
           GF  +DE E ++ L  +DS+IYSILLVGL Q  +SVEAV+L   MV R I++K  Y DS+
Sbjct: 397 GFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYFDSI 456

Query: 191 IKSLQNSGEKELALHLKSAGIM 256
           ++ L+ SG+KE+  H  +  ++
Sbjct: 457 VEHLKESGDKEICTHFCTLALL 478


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 34/80 (42%), Positives = 55/80 (68%)
 Frame = +2

Query: 11  GFEYYDEMEKIDCLPSIDSNIYSILLVGLCQHGYSVEAVRLINAMVKRKIKVKASYTDSL 190
           G+  +DE+EKI  L +IDS+ YS+LLVGLCQ GYS+EA +L  ++++++I +K  Y D +
Sbjct: 394 GYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKRIHLKHPYVDKV 453

Query: 191 IKSLQNSGEKELALHLKSAG 250
           ++ ++  G  +L   L S G
Sbjct: 454 VEYMKKFGVTDLVTELASIG 473