BLASTX nr result

ID: Coptis25_contig00028743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028743
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336549.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002521804.1| conserved hypothetical protein [Ricinus comm...   115   5e-24
ref|XP_002264536.1| PREDICTED: uncharacterized protein LOC100261...   114   1e-23
emb|CAN78615.1| hypothetical protein VITISV_003657 [Vitis vinifera]   114   1e-23
ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243...   113   1e-23

>ref|XP_002336549.1| predicted protein [Populus trichocarpa] gi|222835936|gb|EEE74357.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/96 (56%), Positives = 71/96 (73%)
 Frame = +2

Query: 2   SVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECGKEDSKYTESQIR 181
           SVI +NP++F L +  NEP TH+LKLV    D + +++VENWR  EC +ED       IR
Sbjct: 153 SVIVKNPNLFRLCDG-NEPRTHVLKLVGEFPDNHFTAAVENWRVTECCREDCSVDRMDIR 211

Query: 182 FAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 289
           ++FKH +PPGMRLS+ FR+KVKEWQSL YLGPYE++
Sbjct: 212 YSFKHVYPPGMRLSKTFRAKVKEWQSLPYLGPYEDL 247


>ref|XP_002521804.1| conserved hypothetical protein [Ricinus communis]
           gi|223539017|gb|EEF40614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/96 (56%), Positives = 74/96 (77%)
 Frame = +2

Query: 2   SVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECGKEDSKYTESQIR 181
           S+I+QNP +F L + A+EPNTHILKLV    D + S++V+ WR  EC KED     ++I+
Sbjct: 173 SLISQNPHLFRLCD-AHEPNTHILKLVEEIPDNHFSAAVDIWRVTECCKEDCSVDRTEIQ 231

Query: 182 FAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 289
           F+FKH +PPGMR+S++FR+KVKEWQ L Y+GPYE+V
Sbjct: 232 FSFKHQYPPGMRVSKNFRAKVKEWQRLPYIGPYEKV 267


>ref|XP_002264536.1| PREDICTED: uncharacterized protein LOC100261573 [Vitis vinifera]
          Length = 400

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   SVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECGKED--SKYTESQ 175
           SVI QNP +F L +  NEPNTH+LKLV+     N+ ++VENWR  EC KED  S     +
Sbjct: 171 SVILQNPHLFKLCDG-NEPNTHLLKLVSVIPSVNLRAAVENWRIMECCKEDCGSSVDPLE 229

Query: 176 IRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 289
           +RF+FKH FPPGMRL ++F++KVKEWQ L Y+GPYEE+
Sbjct: 230 LRFSFKHGFPPGMRLGKNFKAKVKEWQRLLYVGPYEEM 267


>emb|CAN78615.1| hypothetical protein VITISV_003657 [Vitis vinifera]
          Length = 1831

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   SVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECGKED--SKYTESQ 175
           SVI QNP +F L +  NEPNTH+LKLV+     N+ ++VENWR  EC KED  S     +
Sbjct: 171 SVILQNPHLFKLCDG-NEPNTHVLKLVSVVPSGNLRAAVENWRIMECCKEDCGSSVDPFE 229

Query: 176 IRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 289
           +RF+FKH FPPGMRL ++F++KVKEWQ L Y+GPYEE+
Sbjct: 230 LRFSFKHGFPPGMRLGKNFKAKVKEWQGLPYVGPYEEM 267


>ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243520 [Vitis vinifera]
          Length = 400

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/98 (57%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   SVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECGKED--SKYTESQ 175
           SVI QNP +F L +  NEPNTH+LKLV+     N+ ++VENWR  EC KED  S     +
Sbjct: 171 SVILQNPHLFKLCDG-NEPNTHVLKLVSVVPSGNLRAAVENWRIMECCKEDCGSSVDPLE 229

Query: 176 IRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 289
           +RF+FKH FPPGMRL ++F++KVKEWQ L Y+GPYEE+
Sbjct: 230 LRFSFKHGFPPGMRLGKNFKAKVKEWQRLPYVGPYEEM 267


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