BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028742
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
emb|CBI28050.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...   102   3e-20
ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1, chloropl...    99   5e-19
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +3

Query: 117 GGKDGISTQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTSVARLAMSMGKG 296
           G  D  + +ED +I VSED KKYAL RGFEIYEKMCLE +P+NEA+LTSVAR+AMSMG G
Sbjct: 287 GVDDSTNKKEDNEIRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNG 346

Query: 297 KMALEMVNRMKEMGINPR 350
            MA +MV +MK +GINPR
Sbjct: 347 DMAFDMVKQMKPLGINPR 364


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +3

Query: 117 GGKDGISTQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTSVARLAMSMGKG 296
           G  D  + +ED +I VSED KKYAL RGFEIYEKMCLE +P+NEA+LTSVAR+AMSMG G
Sbjct: 222 GVDDSTNKKEDNEIRVSEDFKKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNG 281

Query: 297 KMALEMVNRMKEMGINPR 350
            MA +MV +MK +GINPR
Sbjct: 282 DMAFDMVKQMKPLGINPR 299


>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546737|gb|EEF48235.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 745

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/65 (72%), Positives = 58/65 (89%)
 Frame = +3

Query: 156 ILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTSVARLAMSMGKGKMALEMVNRMKEM 335
           ILVSED+KKYAL RGFEIYEKMC++ IP+NEA+LT+VAR+AMSMG G MA +MV +MK +
Sbjct: 230 ILVSEDIKKYALERGFEIYEKMCMDKIPMNEATLTAVARIAMSMGNGDMAFDMVKQMKLL 289

Query: 336 GINPR 350
           G+NPR
Sbjct: 290 GLNPR 294


>ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449506617|ref|XP_004162799.1| PREDICTED:
           proteinaceous RNase P 1,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 633

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/65 (72%), Positives = 54/65 (83%)
 Frame = +3

Query: 156 ILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTSVARLAMSMGKGKMALEMVNRMKEM 335
           ILV ED KKYAL  GFEIYEKMC ENIP+NEA+LTSVAR+AMSMG G  A +MV +MK +
Sbjct: 193 ILVDEDFKKYALETGFEIYEKMCAENIPMNEATLTSVARMAMSMGDGDKAFDMVKQMKPL 252

Query: 336 GINPR 350
           G+NPR
Sbjct: 253 GLNPR 257


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/72 (62%), Positives = 61/72 (84%)
 Frame = +3

Query: 135 STQEDCKILVSEDVKKYALTRGFEIYEKMCLENIPLNEASLTSVARLAMSMGKGKMALEM 314
           ST++D  +LVSEDVK+YAL RGFE+Y+ MCL+ + +NEA+LT+VAR+AMSMG G  A EM
Sbjct: 201 STEKDEILLVSEDVKRYALQRGFEVYQNMCLDKVQMNEAALTAVARMAMSMGDGDRAFEM 260

Query: 315 VNRMKEMGINPR 350
           V +MK++GI+PR
Sbjct: 261 VRQMKDLGISPR 272