BLASTX nr result

ID: Coptis25_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028733
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis] g...   424   e-116
ref|XP_003545967.1| PREDICTED: multiple C2 and transmembrane dom...   422   e-116
ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane dom...   422   e-116
emb|CAN75086.1| hypothetical protein VITISV_010815 [Vitis vinifera]   422   e-116

>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
            predicted protein [Populus trichocarpa]
          Length = 1051

 Score =  434 bits (1116), Expect = e-119
 Identities = 204/233 (87%), Positives = 220/233 (94%)
 Frame = -3

Query: 766  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMITASKWFDDVCQWKNPITS 587
            RAEPPLRKEVVEYMLDVDSH WSMRRSKANFFRIMSL+SG+ + S WF D+CQW+NPITS
Sbjct: 819  RAEPPLRKEVVEYMLDVDSHTWSMRRSKANFFRIMSLISGLFSMSHWFGDICQWRNPITS 878

Query: 586  VLVHVLFLILICYPELILPTLFLYMFLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDE 407
            VLVH+LFLILI YPELILPTLFLYMFLIGIWNYR RPRHPPHMD +LSWAEAVHPDELDE
Sbjct: 879  VLVHILFLILIWYPELILPTLFLYMFLIGIWNYRFRPRHPPHMDTKLSWAEAVHPDELDE 938

Query: 406  EFDSFPTSKGHDIVRMRYDRLRSVAGRIQTVVGDIATQGERIQSLLSWRDPRATSLFIVF 227
            EFD+FPTSK HDIVRMRYDRLR VAGRIQTVVGDIATQGER QSLLSWRDPRATSLFIVF
Sbjct: 939  EFDTFPTSKSHDIVRMRYDRLRGVAGRIQTVVGDIATQGERFQSLLSWRDPRATSLFIVF 998

Query: 226  CLCAAVVLYVTPFKMLAFIAGIYMLRHPRFRSKMPSVPSNFFKRLPARTDSMI 68
            CLCAAVVLYVTPF+++A +AG+Y LRHPRFRSK+PSVPSNFFKRLPARTDS++
Sbjct: 999  CLCAAVVLYVTPFRVVALVAGLYYLRHPRFRSKLPSVPSNFFKRLPARTDSLL 1051


>ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis]
            gi|223547689|gb|EEF49182.1| synaptotagmin, putative
            [Ricinus communis]
          Length = 1049

 Score =  424 bits (1089), Expect = e-116
 Identities = 197/233 (84%), Positives = 219/233 (93%)
 Frame = -3

Query: 766  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMITASKWFDDVCQWKNPITS 587
            RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGM + S+WF D+CQW+NP+TS
Sbjct: 817  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMFSMSRWFGDICQWRNPVTS 876

Query: 586  VLVHVLFLILICYPELILPTLFLYMFLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDE 407
            VLVHVLFLILI YPELILPTLFLYMFLIG+WNYR RPRHPPHMD +LSWAEAVHPDELDE
Sbjct: 877  VLVHVLFLILIWYPELILPTLFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDE 936

Query: 406  EFDSFPTSKGHDIVRMRYDRLRSVAGRIQTVVGDIATQGERIQSLLSWRDPRATSLFIVF 227
            EFD+FPTS+ HD VRMRYDRLRSVAGRIQTVVGD+ATQ ER+  LLSWRDPRATSLF++F
Sbjct: 937  EFDTFPTSRPHDTVRMRYDRLRSVAGRIQTVVGDMATQCERLGCLLSWRDPRATSLFVLF 996

Query: 226  CLCAAVVLYVTPFKMLAFIAGIYMLRHPRFRSKMPSVPSNFFKRLPARTDSMI 68
            CLCAAVVLY TPF+++A +AG+Y LRHP+FRSK+PSVPSNFFKRLPARTDS++
Sbjct: 997  CLCAAVVLYATPFRVVALVAGLYYLRHPKFRSKLPSVPSNFFKRLPARTDSLL 1049


>ref|XP_003545967.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 894

 Score =  422 bits (1085), Expect = e-116
 Identities = 196/233 (84%), Positives = 215/233 (92%)
 Frame = -3

Query: 766  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMITASKWFDDVCQWKNPITS 587
            RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSL SG+IT  +WF  VC WKNPITS
Sbjct: 662  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGIITMGQWFSQVCHWKNPITS 721

Query: 586  VLVHVLFLILICYPELILPTLFLYMFLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDE 407
            +LVH+LFLILICYPELILPTLFLYMFLIG+WNYR RPRHPPHMD +LSWAE VHPDELDE
Sbjct: 722  ILVHILFLILICYPELILPTLFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEVVHPDELDE 781

Query: 406  EFDSFPTSKGHDIVRMRYDRLRSVAGRIQTVVGDIATQGERIQSLLSWRDPRATSLFIVF 227
            EFD+FPTS+ HD+V+MRYDRLRSVAGRIQTVVGDIATQGER QSLLSWRDPRATS F+VF
Sbjct: 782  EFDTFPTSRPHDVVKMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDPRATSFFVVF 841

Query: 226  CLCAAVVLYVTPFKMLAFIAGIYMLRHPRFRSKMPSVPSNFFKRLPARTDSMI 68
             LC+AVVLY TP K++A + G+Y LRHP+FRSK+PSVPSNFFKRLPARTDSM+
Sbjct: 842  SLCSAVVLYATPPKVVAMVTGLYYLRHPKFRSKLPSVPSNFFKRLPARTDSML 894


>ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 794

 Score =  422 bits (1084), Expect = e-116
 Identities = 199/233 (85%), Positives = 217/233 (93%)
 Frame = -3

Query: 766  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMITASKWFDDVCQWKNPITS 587
            RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRI+SL SGMI+ S+W  +VCQWKNP+TS
Sbjct: 562  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIVSLFSGMISMSRWLGEVCQWKNPVTS 621

Query: 586  VLVHVLFLILICYPELILPTLFLYMFLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDE 407
            VLVHVLF ILICYPELILPT+FLYMFLIGIWNYR RPRHPPHMD +LSWAEAVH DELDE
Sbjct: 622  VLVHVLFFILICYPELILPTIFLYMFLIGIWNYRFRPRHPPHMDTKLSWAEAVHRDELDE 681

Query: 406  EFDSFPTSKGHDIVRMRYDRLRSVAGRIQTVVGDIATQGERIQSLLSWRDPRATSLFIVF 227
            EFD+FPTSK  D+V MRYDRLRSVAGRIQTVVGD+ATQGER QSLLSWRDPRATSL+IVF
Sbjct: 682  EFDTFPTSKPQDVVMMRYDRLRSVAGRIQTVVGDMATQGERFQSLLSWRDPRATSLYIVF 741

Query: 226  CLCAAVVLYVTPFKMLAFIAGIYMLRHPRFRSKMPSVPSNFFKRLPARTDSMI 68
            CL AAVVLYVTPFK+LA +AG++ LRHPRFRSKMPS PSNFF+RLPAR+DSM+
Sbjct: 742  CLIAAVVLYVTPFKILALVAGLFWLRHPRFRSKMPSAPSNFFRRLPARSDSML 794


>emb|CAN75086.1| hypothetical protein VITISV_010815 [Vitis vinifera]
          Length = 794

 Score =  422 bits (1084), Expect = e-116
 Identities = 199/233 (85%), Positives = 217/233 (93%)
 Frame = -3

Query: 766  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGMITASKWFDDVCQWKNPITS 587
            RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRI+SL SGMI+ S+W  +VCQWKNP+TS
Sbjct: 562  RAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIVSLFSGMISMSRWLGEVCQWKNPVTS 621

Query: 586  VLVHVLFLILICYPELILPTLFLYMFLIGIWNYRARPRHPPHMDIRLSWAEAVHPDELDE 407
            VLVHVLF ILICYPELILPT+FLYMFLIGIWNYR RPRHPPHMD +LSWAEAVH DELDE
Sbjct: 622  VLVHVLFFILICYPELILPTIFLYMFLIGIWNYRFRPRHPPHMDTKLSWAEAVHRDELDE 681

Query: 406  EFDSFPTSKGHDIVRMRYDRLRSVAGRIQTVVGDIATQGERIQSLLSWRDPRATSLFIVF 227
            EFD+FPTSK  D+V MRYDRLRSVAGRIQTVVGD+ATQGER QSLLSWRDPRATSL+IVF
Sbjct: 682  EFDTFPTSKPQDVVXMRYDRLRSVAGRIQTVVGDMATQGERFQSLLSWRDPRATSLYIVF 741

Query: 226  CLCAAVVLYVTPFKMLAFIAGIYMLRHPRFRSKMPSVPSNFFKRLPARTDSMI 68
            CL AAVVLYVTPFK+LA +AG++ LRHPRFRSKMPS PSNFF+RLPAR+DSM+
Sbjct: 742  CLIAAVVLYVTPFKILALVAGLFWLRHPRFRSKMPSAPSNFFRRLPARSDSML 794


Top