BLASTX nr result

ID: Coptis25_contig00028728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028728
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24140.3| unnamed protein product [Vitis vinifera]              352   1e-94
ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [...   352   1e-94
ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258...   346   4e-93
ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|2...   322   7e-86

>emb|CBI24140.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  352 bits (902), Expect = 1e-94
 Identities = 193/334 (57%), Positives = 236/334 (70%), Gaps = 19/334 (5%)
 Frame = -3

Query: 960 MGHHCCTKQKVKRGLWSPEEDEKLIKCITTHGHGCWSAVPKLAGLQRCGKSCRLRWINYL 781
           MGH CC+KQKVKRGLWSPEEDEKLI+ IT HGHG WS+VPKLAGLQRCGKSCRLRWINYL
Sbjct: 1   MGHRCCSKQKVKRGLWSPEEDEKLIRYITAHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60

Query: 780 RPDLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL 601
           RP+LKRGSFS+QEE+ IID HRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLI+QGL
Sbjct: 61  RPELKRGSFSAQEEQSIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGL 120

Query: 600 DPKTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDASMDMNQ--SFITLLSP 427
           DPKTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DASM++N+   F+TL   
Sbjct: 121 DPKTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDASMEVNRLPPFVTL--- 177

Query: 426 HASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPL 271
                  PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SSI  TP+
Sbjct: 178 -------PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSIGSTPI 229

Query: 270 ----SSTSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQDKV-----VGD 118
               SS+S+NP G GFLD EN +W +  +E +  P  E++       Q D+      +G+
Sbjct: 230 ISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNKINIGE 287

Query: 117 QVELEARDNGQDMDTSFSECSNFDLEFMESPLIS 16
                 +  GQD+D SF + S+FDLEF+ES L+S
Sbjct: 288 MGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS 320


>ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [Vitis vinifera]
           gi|147854236|emb|CAN83435.1| hypothetical protein
           VITISV_010137 [Vitis vinifera]
          Length = 337

 Score =  352 bits (902), Expect = 1e-94
 Identities = 193/334 (57%), Positives = 236/334 (70%), Gaps = 19/334 (5%)
 Frame = -3

Query: 960 MGHHCCTKQKVKRGLWSPEEDEKLIKCITTHGHGCWSAVPKLAGLQRCGKSCRLRWINYL 781
           MGH CC+KQKVKRGLWSPEEDEKLI+ IT HGHG WS+VPKLAGLQRCGKSCRLRWINYL
Sbjct: 1   MGHRCCSKQKVKRGLWSPEEDEKLIRYITAHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60

Query: 780 RPDLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL 601
           RP+LKRGSFS+QEE+ IID HRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLI+QGL
Sbjct: 61  RPELKRGSFSAQEEQSIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGL 120

Query: 600 DPKTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDASMDMNQ--SFITLLSP 427
           DPKTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DASM++N+   F+TL   
Sbjct: 121 DPKTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDASMEVNRLPPFVTL--- 177

Query: 426 HASSTIHPPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPL 271
                  PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   SSI  TP+
Sbjct: 178 -------PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSIGSTPI 229

Query: 270 ----SSTSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQDKV-----VGD 118
               SS+S+NP G GFLD EN +W +  +E +  P  E++       Q D+      +G+
Sbjct: 230 ISSSSSSSVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNKINIGE 287

Query: 117 QVELEARDNGQDMDTSFSECSNFDLEFMESPLIS 16
                 +  GQD+D SF + S+FDLEF+ES L+S
Sbjct: 288 MGNDHEQKCGQDIDVSF-DSSSFDLEFVESTLLS 320


>ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258147 [Vitis vinifera]
           gi|297738187|emb|CBI27388.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  346 bits (888), Expect = 4e-93
 Identities = 186/332 (56%), Positives = 227/332 (68%), Gaps = 15/332 (4%)
 Frame = -3

Query: 960 MGHHCCTKQKVKRGLWSPEEDEKLIKCITTHGHGCWSAVPKLAGLQRCGKSCRLRWINYL 781
           MGHHCC+KQKVKRGLWSPEEDEKLI+ ITT+GHGCWS+VPKLAGLQRCGKSCRLRWINYL
Sbjct: 1   MGHHCCSKQKVKRGLWSPEEDEKLIRYITTNGHGCWSSVPKLAGLQRCGKSCRLRWINYL 60

Query: 780 RPDLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL 601
           RPDLKRGSFS+QEER IID HRI+GN+WAQIAK+LPGRTDNEVKNFWNSCIKKKLIAQGL
Sbjct: 61  RPDLKRGSFSAQEERTIIDVHRIVGNKWAQIAKYLPGRTDNEVKNFWNSCIKKKLIAQGL 120

Query: 600 DPKTHN-LMPSHQIHNNIK--NACNVNQFYQQPSS-VFSINTQIRSDASMDMNQSFITL- 436
           DP TH+ L+P  QI+NN    NAC ++  +QQP++ VFS NTQ+  DA MDM   F+TL 
Sbjct: 121 DPNTHHLLLPIDQINNNNNNTNACTLSHIHQQPTALVFSSNTQMIKDAKMDMKSPFLTLP 180

Query: 435 ---LSPHASSTIHPPLPQASMSISTLDYQNQNHVW-PAANDQNSPASTYFANQSSI---T 277
                P  S++IHPP      +I   ++ N N+VW    +DQN  A     N+SS+   T
Sbjct: 181 PLPPPPDTSNSIHPPSLHGISAIPPFEFLNPNYVWMTTVSDQNQHAVMELVNRSSMGRST 240

Query: 276 PLSSTSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNIAG--QVMQQDKVV-GDQVEL 106
           P+    +NPSG   L+       +  +   +   E    + G  Q  ++DKV  G     
Sbjct: 241 PIGPYQINPSGFEVLE-------ENYMRDTIASLEPRKQLEGVQQQQEEDKVCEGKADNS 293

Query: 105 EARDNGQDMDTSFSECSNFDLEFMESPLISCG 10
           +   NG+++D SF  CS FDLE   S L+ CG
Sbjct: 294 KELRNGENIDNSFDSCS-FDLELEYSGLLPCG 324


>ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|222841147|gb|EEE78694.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  335 bits (858), Expect = 1e-89
 Identities = 180/331 (54%), Positives = 230/331 (69%), Gaps = 10/331 (3%)
 Frame = -3

Query: 963 KMGHHCCTKQKVKRGLWSPEEDEKLIKCITTHGHGCWSAVPKLAGLQRCGKSCRLRWINY 784
           K GH CC+K+KVKRGLWSP+EDEKLIK ITTHGHG WS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 14  KTGHQCCSKRKVKRGLWSPDEDEKLIKYITTHGHGSWSSVPKLAGLQRCGKSCRLRWINY 73

Query: 783 LRPDLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQG 604
           LRPDLKRGSF++QEE II++ HR+LGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQG
Sbjct: 74  LRPDLKRGSFTAQEESIIVEIHRMLGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQG 133

Query: 603 LDPKTHNLMPSHQIHNNIKNACNVNQF---YQQPSSVFSINTQIRSDASMDMNQSFITL- 436
           LDPKTHNL+ ++  HNN  NAC +  +   +QQ +S F++++QI +D SMDM    I   
Sbjct: 134 LDPKTHNLLSNNYKHNNNNNACELISYQYSHQQTTSTFTVDSQI-NDTSMDMKAPLIPFP 192

Query: 435 -LSPHASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPLSS 265
            + P   +  +PPL     SIST +YQN N +          A     ++SSI   P+SS
Sbjct: 193 TIPPVPDTNPYPPLLHKFSSISTCEYQNPNTL----------AFLESGSKSSIGSVPVSS 242

Query: 264 TSMNPSGLGFLDHENCLWSDGG--IESMVTPTEE-EMNIAGQVMQQDKVVGDQVELEARD 94
           ++ +PS  G LD E C+W+ G   I+S+ +  E+ E  +   + + ++++G         
Sbjct: 243 STSHPSEFGMLD-ETCMWAGGYELIQSIKSEKEQPEQQVELTIEKTNELIG--------- 292

Query: 93  NGQDMDTSFSECSNFDLEFMESPLISCGLMY 1
            GQ+M  SF E S FD +F+ES L+ CG+ Y
Sbjct: 293 AGQNMVASF-ETSTFDFDFLESTLLPCGMYY 322


>ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|222846644|gb|EEE84191.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  322 bits (826), Expect = 7e-86
 Identities = 181/332 (54%), Positives = 220/332 (66%), Gaps = 12/332 (3%)
 Frame = -3

Query: 960 MGHHCCTKQKVKRGLWSPEEDEKLIKCITTHGHGCWSAVPKLAGLQRCGKSCRLRWINYL 781
           MGH CC KQKVKRGLWSPEEDEKLIK IT HGHG WS+VP LAGL+RCGKSCRLRWINYL
Sbjct: 1   MGHQCCRKQKVKRGLWSPEEDEKLIKYITIHGHGSWSSVPNLAGLERCGKSCRLRWINYL 60

Query: 780 RPDLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL 601
           RPDLKRGS +++EERII+D HRILGN+WAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL
Sbjct: 61  RPDLKRGSITAKEERIIVDTHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGL 120

Query: 600 DPKTHNLMPSHQIHNNIKNACNVN-QFYQQPSSVFSINTQIRSDASMDMNQSFITLLSPH 424
           DP THNL+ ++  HNN  +A  ++   +QQP+S F++N+QI   +SM M    I      
Sbjct: 121 DPNTHNLLSTNYKHNNNNDAWKLSYHSHQQPTSTFTVNSQISDISSMVMKAPPIPFPMIP 180

Query: 423 ASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSSI--TPLSSTSMNP 250
            +   +PPL     SI T +YQN          Q    ST  A+QSSI   P+ S++ +P
Sbjct: 181 LAPDTNPPLSHEFSSILTYEYQN-------PRTQTFLEST--ASQSSIGSVPIFSSTSHP 231

Query: 249 SGLGFLDHENCLWSDGGIESMVTPTEEEMNIAGQVMQQ---DKVVGDQVELEARDNGQDM 79
           S  G LD E+C+W+ G       PT+  +    Q  QQ   +K+ G     E    GQ+M
Sbjct: 232 SEFGMLD-ESCMWAGG-----YDPTQSIIPEKKQPEQQVGIEKITGH----ELTSAGQNM 281

Query: 78  DTSFSECSN------FDLEFMESPLISCGLMY 1
           D SF E SN      FD +F+ES L+ CG+ Y
Sbjct: 282 DASF-ETSNFDFDFDFDFDFVESTLLPCGMYY 312


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