BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028727
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001595533.1| ATP-dependent protease proteolytic subunit [...   118   6e-25
ref|YP_740590.1| clp protease proteolytic subunit [Platanus occi...   117   7e-25
ref|YP_002836115.1| clp protease proteolytic subunit [Megalerant...   117   1e-24
ref|YP_004769653.1| clp protease proteolytic subunit (chloroplas...   117   1e-24
gb|ADD31123.1| clp protease proteolytic subunit protein [Trochod...   117   1e-24

>ref|YP_001595533.1| ATP-dependent protease proteolytic subunit [Lemna minor]
           gi|88696795|gb|ABD48520.1| ATP-dependent protease
           proteolytic subunit [Lemna minor]
          Length = 202

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/81 (72%), Positives = 62/81 (76%)
 Frame = +3

Query: 267 RVMIHQPASSYYEAQTGXXXXXXXXXXXXXXXXXXVYVQRTGNPLWVVSEDMERDVFMSA 446
           RVMIHQPASS+YEAQ G                  VYVQRTGNPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSA 181

Query: 447 TEAQAYGIVDLVAVENTGDFT 509
           TEAQAYG++DLVAVENTGDFT
Sbjct: 182 TEAQAYGLIDLVAVENTGDFT 202


>ref|YP_740590.1| clp protease proteolytic subunit [Platanus occidentalis]
           gi|122166011|sp|Q09G21.1|CLPP_PLAOC RecName:
           Full=ATP-dependent Clp protease proteolytic subunit;
           AltName: Full=Endopeptidase Clp
           gi|114054410|gb|ABI49804.1| clp protease proteolytic
           subunit [Platanus occidentalis]
          Length = 202

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/81 (74%), Positives = 63/81 (77%)
 Frame = +3

Query: 267 RVMIHQPASSYYEAQTGXXXXXXXXXXXXXXXXXXVYVQRTGNPLWVVSEDMERDVFMSA 446
           RVMIHQPASS+YEAQTG                  VYVQRTGNPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSA 181

Query: 447 TEAQAYGIVDLVAVENTGDFT 509
           TEAQA+GIVDLVAVEN+GDFT
Sbjct: 182 TEAQAHGIVDLVAVENSGDFT 202


>ref|YP_002836115.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
           gi|226933907|gb|ACO92040.1| clp protease proteolytic
           subunit [Megaleranthis saniculifolia]
          Length = 201

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +3

Query: 267 RVMIHQPASSYYEAQTGXXXXXXXXXXXXXXXXXXVYVQRTGNPLWVVSEDMERDVFMSA 446
           RVMIHQPASS+YEAQTG                  VYVQRTGNPLWVVSEDMERDVFMSA
Sbjct: 121 RVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSA 180

Query: 447 TEAQAYGIVDLVAVENTGDFT 509
           TEAQA+GIVDLVAVEN GDFT
Sbjct: 181 TEAQAHGIVDLVAVENAGDFT 201


>ref|YP_004769653.1| clp protease proteolytic subunit (chloroplast) [Spirodela
           polyrhiza] gi|341834094|gb|AEK94365.1| clp protease
           proteolytic subunit [Spirodela polyrhiza]
          Length = 201

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/80 (73%), Positives = 61/80 (76%)
 Frame = +3

Query: 267 RVMIHQPASSYYEAQTGXXXXXXXXXXXXXXXXXXVYVQRTGNPLWVVSEDMERDVFMSA 446
           RVMIHQPASS+YEAQ G                  VYVQRTGNPLWVVSEDMERDVFMSA
Sbjct: 121 RVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSA 180

Query: 447 TEAQAYGIVDLVAVENTGDF 506
           TEAQAYGI+DLVAVENTGDF
Sbjct: 181 TEAQAYGIIDLVAVENTGDF 200


>gb|ADD31123.1| clp protease proteolytic subunit protein [Trochodendron aralioides]
          Length = 202

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/81 (72%), Positives = 63/81 (77%)
 Frame = +3

Query: 267 RVMIHQPASSYYEAQTGXXXXXXXXXXXXXXXXXXVYVQRTGNPLWVVSEDMERDVFMSA 446
           RVMIHQPASS+YEAQTG                  VYVQRTGNPLWVVSEDMERDVFMSA
Sbjct: 122 RVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGNPLWVVSEDMERDVFMSA 181

Query: 447 TEAQAYGIVDLVAVENTGDFT 509
           TEAQA+G+VDLVAVEN+GDFT
Sbjct: 182 TEAQAHGLVDLVAVENSGDFT 202