BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00028721
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                       163   2e-38
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   160   1e-37
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   157   9e-37
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   155   3e-36
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   154   7e-36

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  163 bits (412), Expect = 2e-38
 Identities = 73/108 (67%), Positives = 90/108 (83%)
 Frame = +3

Query: 3    TWELVELPPRKDAIGVKWVYKVKYNADGSVQKFKARLVVKGYVQKYGIDYVDTFSPVARY 182
            TW+LVELP  K +IGVKWV+K KY AD ++QK+KARLVVKGY Q+YG+DY  TFSPVAR+
Sbjct: 678  TWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARF 737

Query: 183  ETVRIILGLAAQNKWPVFQFDVKSAFLNGSLEEDVYVAQPQGFIVEGQ 326
            +T+R +L L A   WP++QFDVKSAFLNG L E+VYV QP+GFIVEG+
Sbjct: 738  DTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGR 785


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  160 bits (404), Expect = 1e-37
 Identities = 73/107 (68%), Positives = 91/107 (85%)
 Frame = +3

Query: 3    TWELVELPPRKDAIGVKWVYKVKYNADGSVQKFKARLVVKGYVQKYGIDYVDTFSPVARY 182
            TWELV+ P  K+ IG+KWV++ KYNADGS+QK KARLV KGY Q+ G+D+ +TFSPVAR+
Sbjct: 847  TWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARF 906

Query: 183  ETVRIILGLAAQNKWPVFQFDVKSAFLNGSLEEDVYVAQPQGFIVEG 323
            ETVR++L LAAQ   PV+QFDVKSAFLNG LEE+VYV+QPQGF++ G
Sbjct: 907  ETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITG 953


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  157 bits (397), Expect = 9e-37
 Identities = 74/105 (70%), Positives = 87/105 (82%)
 Frame = +3

Query: 3    TWELVELPPRKDAIGVKWVYKVKYNADGSVQKFKARLVVKGYVQKYGIDYVDTFSPVARY 182
            TWELVELP  K+ IGVKWV++ KY ADGS+QK KARLV KGY Q++G+DY DTFSPVAR+
Sbjct: 947  TWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARF 1006

Query: 183  ETVRIILGLAAQNKWPVFQFDVKSAFLNGSLEEDVYVAQPQGFIV 317
            ETVR +L LAA   W V+QFDVKSAFLNG L E+VY +QP+GFIV
Sbjct: 1007 ETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIV 1051


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  155 bits (392), Expect = 3e-36
 Identities = 71/108 (65%), Positives = 87/108 (80%)
 Frame = +3

Query: 3   TWELVELPPRKDAIGVKWVYKVKYNADGSVQKFKARLVVKGYVQKYGIDYVDTFSPVARY 182
           TWEL  LP   +AIGVKWV+K+K NA G V++ KARLV KGY Q+Y +DY + F+PVAR 
Sbjct: 556 TWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAKGYKQQYEVDYDEVFAPVARM 615

Query: 183 ETVRIILGLAAQNKWPVFQFDVKSAFLNGSLEEDVYVAQPQGFIVEGQ 326
           ET+R+++ LAAQ KW +FQFDVKSAFLNG LEEDVYV QP GF++EGQ
Sbjct: 616 ETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVEQPMGFVIEGQ 663


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  154 bits (389), Expect = 7e-36
 Identities = 73/105 (69%), Positives = 86/105 (81%)
 Frame = +3

Query: 3    TWELVELPPRKDAIGVKWVYKVKYNADGSVQKFKARLVVKGYVQKYGIDYVDTFSPVARY 182
            TWELVELP  K+ IGVKWV++ KY ADGS+QK KARLV KGY Q++G+DY DTFSPVAR+
Sbjct: 776  TWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARF 835

Query: 183  ETVRIILGLAAQNKWPVFQFDVKSAFLNGSLEEDVYVAQPQGFIV 317
            ETVR +L LAA   W  +QFDVKSAFLNG L E+VYV+Q +GFIV
Sbjct: 836  ETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIV 880